Cargando…

Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia

BACKGROUND: COVID-19 spread may have a dramatic impact in countries with vulnerable economies and limited availability of, and access to, healthcare resources and infrastructures. However, in sub-Saharan Africa, a low prevalence and mortality have been observed so far. METHODS: We collected data on...

Descripción completa

Detalles Bibliográficos
Autores principales: Trentini, Filippo, Guzzetta, Giorgio, Galli, Margherita, Zardini, Agnese, Manenti, Fabio, Putoto, Giovanni, Marziano, Valentina, Gamshie, Worku Nigussa, Tsegaye, Ademe, Greblo, Alessandro, Melegaro, Alessia, Ajelli, Marco, Merler, Stefano, Poletti, Piero
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8032453/
https://www.ncbi.nlm.nih.gov/pubmed/33832497
http://dx.doi.org/10.1186/s12916-021-01967-w
_version_ 1783676214523723776
author Trentini, Filippo
Guzzetta, Giorgio
Galli, Margherita
Zardini, Agnese
Manenti, Fabio
Putoto, Giovanni
Marziano, Valentina
Gamshie, Worku Nigussa
Tsegaye, Ademe
Greblo, Alessandro
Melegaro, Alessia
Ajelli, Marco
Merler, Stefano
Poletti, Piero
author_facet Trentini, Filippo
Guzzetta, Giorgio
Galli, Margherita
Zardini, Agnese
Manenti, Fabio
Putoto, Giovanni
Marziano, Valentina
Gamshie, Worku Nigussa
Tsegaye, Ademe
Greblo, Alessandro
Melegaro, Alessia
Ajelli, Marco
Merler, Stefano
Poletti, Piero
author_sort Trentini, Filippo
collection PubMed
description BACKGROUND: COVID-19 spread may have a dramatic impact in countries with vulnerable economies and limited availability of, and access to, healthcare resources and infrastructures. However, in sub-Saharan Africa, a low prevalence and mortality have been observed so far. METHODS: We collected data on individuals’ social contacts in the South West Shewa Zone (SWSZ) of Ethiopia across geographical contexts characterized by heterogeneous population density, work and travel opportunities, and access to primary care. We assessed how socio-demographic factors and observed mixing patterns can influence the COVID-19 disease burden, by simulating SARS-CoV-2 transmission in remote settlements, rural villages, and urban neighborhoods, under school closure mandate. RESULTS: From national surveillance data, we estimated a net reproduction number of 1.62 (95% CI 1.55–1.70). We found that, at the end of an epidemic mitigated by school closure alone, 10–15% of the population residing in the SWSZ would have been symptomatic and 0.3–0.4% of the population would require mechanical ventilation and/or possibly result in a fatal outcome. Higher infection attack rates are expected in more urbanized areas, but the highest incidence of critical disease is expected in remote subsistence farming settlements. School closure contributed to reduce the reproduction number by 49% and the attack rate of infections by 28–34%. CONCLUSIONS: Our results suggest that the relatively low burden of COVID-19 in Ethiopia observed so far may depend on social mixing patterns, underlying demography, and the enacted school closures. Our findings highlight that socio-demographic factors can also determine marked heterogeneities across different geographical contexts within the same region, and they contribute to understand why sub-Saharan Africa is experiencing a relatively lower attack rate of severe cases compared to high-income countries.
format Online
Article
Text
id pubmed-8032453
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-80324532021-04-09 Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia Trentini, Filippo Guzzetta, Giorgio Galli, Margherita Zardini, Agnese Manenti, Fabio Putoto, Giovanni Marziano, Valentina Gamshie, Worku Nigussa Tsegaye, Ademe Greblo, Alessandro Melegaro, Alessia Ajelli, Marco Merler, Stefano Poletti, Piero BMC Med Research Article BACKGROUND: COVID-19 spread may have a dramatic impact in countries with vulnerable economies and limited availability of, and access to, healthcare resources and infrastructures. However, in sub-Saharan Africa, a low prevalence and mortality have been observed so far. METHODS: We collected data on individuals’ social contacts in the South West Shewa Zone (SWSZ) of Ethiopia across geographical contexts characterized by heterogeneous population density, work and travel opportunities, and access to primary care. We assessed how socio-demographic factors and observed mixing patterns can influence the COVID-19 disease burden, by simulating SARS-CoV-2 transmission in remote settlements, rural villages, and urban neighborhoods, under school closure mandate. RESULTS: From national surveillance data, we estimated a net reproduction number of 1.62 (95% CI 1.55–1.70). We found that, at the end of an epidemic mitigated by school closure alone, 10–15% of the population residing in the SWSZ would have been symptomatic and 0.3–0.4% of the population would require mechanical ventilation and/or possibly result in a fatal outcome. Higher infection attack rates are expected in more urbanized areas, but the highest incidence of critical disease is expected in remote subsistence farming settlements. School closure contributed to reduce the reproduction number by 49% and the attack rate of infections by 28–34%. CONCLUSIONS: Our results suggest that the relatively low burden of COVID-19 in Ethiopia observed so far may depend on social mixing patterns, underlying demography, and the enacted school closures. Our findings highlight that socio-demographic factors can also determine marked heterogeneities across different geographical contexts within the same region, and they contribute to understand why sub-Saharan Africa is experiencing a relatively lower attack rate of severe cases compared to high-income countries. BioMed Central 2021-04-09 /pmc/articles/PMC8032453/ /pubmed/33832497 http://dx.doi.org/10.1186/s12916-021-01967-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Trentini, Filippo
Guzzetta, Giorgio
Galli, Margherita
Zardini, Agnese
Manenti, Fabio
Putoto, Giovanni
Marziano, Valentina
Gamshie, Worku Nigussa
Tsegaye, Ademe
Greblo, Alessandro
Melegaro, Alessia
Ajelli, Marco
Merler, Stefano
Poletti, Piero
Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia
title Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia
title_full Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia
title_fullStr Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia
title_full_unstemmed Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia
title_short Modeling the interplay between demography, social contact patterns, and SARS-CoV-2 transmission in the South West Shewa Zone of Oromia Region, Ethiopia
title_sort modeling the interplay between demography, social contact patterns, and sars-cov-2 transmission in the south west shewa zone of oromia region, ethiopia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8032453/
https://www.ncbi.nlm.nih.gov/pubmed/33832497
http://dx.doi.org/10.1186/s12916-021-01967-w
work_keys_str_mv AT trentinifilippo modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT guzzettagiorgio modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT gallimargherita modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT zardiniagnese modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT manentifabio modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT putotogiovanni modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT marzianovalentina modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT gamshieworkunigussa modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT tsegayeademe modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT grebloalessandro modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT melegaroalessia modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT ajellimarco modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT merlerstefano modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia
AT polettipiero modelingtheinterplaybetweendemographysocialcontactpatternsandsarscov2transmissioninthesouthwestshewazoneoforomiaregionethiopia