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Predicting the clinical management of skin lesions using deep learning
Automated machine learning approaches to skin lesion diagnosis from images are approaching dermatologist-level performance. However, current machine learning approaches that suggest management decisions rely on predicting the underlying skin condition to infer a management decision without consideri...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8032721/ https://www.ncbi.nlm.nih.gov/pubmed/33833293 http://dx.doi.org/10.1038/s41598-021-87064-7 |
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author | Abhishek, Kumar Kawahara, Jeremy Hamarneh, Ghassan |
author_facet | Abhishek, Kumar Kawahara, Jeremy Hamarneh, Ghassan |
author_sort | Abhishek, Kumar |
collection | PubMed |
description | Automated machine learning approaches to skin lesion diagnosis from images are approaching dermatologist-level performance. However, current machine learning approaches that suggest management decisions rely on predicting the underlying skin condition to infer a management decision without considering the variability of management decisions that may exist within a single condition. We present the first work to explore image-based prediction of clinical management decisions directly without explicitly predicting the diagnosis. In particular, we use clinical and dermoscopic images of skin lesions along with patient metadata from the Interactive Atlas of Dermoscopy dataset (1011 cases; 20 disease labels; 3 management decisions) and demonstrate that predicting management labels directly is more accurate than predicting the diagnosis and then inferring the management decision ([Formula: see text] and [Formula: see text] improvement in overall accuracy and AUROC respectively), statistically significant at [Formula: see text] . Directly predicting management decisions also considerably reduces the over-excision rate as compared to management decisions inferred from diagnosis predictions (24.56% fewer cases wrongly predicted to be excised). Furthermore, we show that training a model to also simultaneously predict the seven-point criteria and the diagnosis of skin lesions yields an even higher accuracy (improvements of [Formula: see text] and [Formula: see text] in overall accuracy and AUROC respectively) of management predictions. Finally, we demonstrate our model’s generalizability by evaluating on the publicly available MClass-D dataset and show that our model agrees with the clinical management recommendations of 157 dermatologists as much as they agree amongst each other. |
format | Online Article Text |
id | pubmed-8032721 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80327212021-04-09 Predicting the clinical management of skin lesions using deep learning Abhishek, Kumar Kawahara, Jeremy Hamarneh, Ghassan Sci Rep Article Automated machine learning approaches to skin lesion diagnosis from images are approaching dermatologist-level performance. However, current machine learning approaches that suggest management decisions rely on predicting the underlying skin condition to infer a management decision without considering the variability of management decisions that may exist within a single condition. We present the first work to explore image-based prediction of clinical management decisions directly without explicitly predicting the diagnosis. In particular, we use clinical and dermoscopic images of skin lesions along with patient metadata from the Interactive Atlas of Dermoscopy dataset (1011 cases; 20 disease labels; 3 management decisions) and demonstrate that predicting management labels directly is more accurate than predicting the diagnosis and then inferring the management decision ([Formula: see text] and [Formula: see text] improvement in overall accuracy and AUROC respectively), statistically significant at [Formula: see text] . Directly predicting management decisions also considerably reduces the over-excision rate as compared to management decisions inferred from diagnosis predictions (24.56% fewer cases wrongly predicted to be excised). Furthermore, we show that training a model to also simultaneously predict the seven-point criteria and the diagnosis of skin lesions yields an even higher accuracy (improvements of [Formula: see text] and [Formula: see text] in overall accuracy and AUROC respectively) of management predictions. Finally, we demonstrate our model’s generalizability by evaluating on the publicly available MClass-D dataset and show that our model agrees with the clinical management recommendations of 157 dermatologists as much as they agree amongst each other. Nature Publishing Group UK 2021-04-08 /pmc/articles/PMC8032721/ /pubmed/33833293 http://dx.doi.org/10.1038/s41598-021-87064-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Abhishek, Kumar Kawahara, Jeremy Hamarneh, Ghassan Predicting the clinical management of skin lesions using deep learning |
title | Predicting the clinical management of skin lesions using deep learning |
title_full | Predicting the clinical management of skin lesions using deep learning |
title_fullStr | Predicting the clinical management of skin lesions using deep learning |
title_full_unstemmed | Predicting the clinical management of skin lesions using deep learning |
title_short | Predicting the clinical management of skin lesions using deep learning |
title_sort | predicting the clinical management of skin lesions using deep learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8032721/ https://www.ncbi.nlm.nih.gov/pubmed/33833293 http://dx.doi.org/10.1038/s41598-021-87064-7 |
work_keys_str_mv | AT abhishekkumar predictingtheclinicalmanagementofskinlesionsusingdeeplearning AT kawaharajeremy predictingtheclinicalmanagementofskinlesionsusingdeeplearning AT hamarnehghassan predictingtheclinicalmanagementofskinlesionsusingdeeplearning |