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Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis

BACKGROUND: Tuberculous meningitis (TBM) is the most severe form of tuberculosis, but differentiating between the diagnosis of TBM and viral meningitis (VM) is difficult. Thus, we have developed machine-learning modules for differentiating TBM from VM. MATERIAL AND METHODS: For the training data, co...

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Autores principales: Jeong, Young-Seob, Jeon, Minjun, Park, Joung Ha, Kim, Min-Chul, Lee, Eunyoung, Park, Se Yoon, Lee, Yu-Mi, Choi, Sungim, Park, Seong Yeon, Park, Ki-Ho, Kim, Sung-Han, Jeon, Min Huok, Choo, Eun Ju, Kim, Tae Hyong, Lee, Mi Suk, Kim, Tark
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society of Infectious Diseases; Korean Society for Antimicrobial Therapy; The Korean Society for AIDS 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8032912/
https://www.ncbi.nlm.nih.gov/pubmed/33538134
http://dx.doi.org/10.3947/ic.2020.0104
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author Jeong, Young-Seob
Jeon, Minjun
Park, Joung Ha
Kim, Min-Chul
Lee, Eunyoung
Park, Se Yoon
Lee, Yu-Mi
Choi, Sungim
Park, Seong Yeon
Park, Ki-Ho
Kim, Sung-Han
Jeon, Min Huok
Choo, Eun Ju
Kim, Tae Hyong
Lee, Mi Suk
Kim, Tark
author_facet Jeong, Young-Seob
Jeon, Minjun
Park, Joung Ha
Kim, Min-Chul
Lee, Eunyoung
Park, Se Yoon
Lee, Yu-Mi
Choi, Sungim
Park, Seong Yeon
Park, Ki-Ho
Kim, Sung-Han
Jeon, Min Huok
Choo, Eun Ju
Kim, Tae Hyong
Lee, Mi Suk
Kim, Tark
author_sort Jeong, Young-Seob
collection PubMed
description BACKGROUND: Tuberculous meningitis (TBM) is the most severe form of tuberculosis, but differentiating between the diagnosis of TBM and viral meningitis (VM) is difficult. Thus, we have developed machine-learning modules for differentiating TBM from VM. MATERIAL AND METHODS: For the training data, confirmed or probable TBM and confirmed VM cases were retrospectively collected from five teaching hospitals in Korea between January 2000 - July 2018. Various machine-learning algorithms were used for training. The machine-learning algorithms were tested by the leave-one-out cross-validation. Four residents and two infectious disease specialists were tested using the summarized medical information. RESULTS: The training study comprised data from 60 patients with confirmed or probable TBM and 143 patients with confirmed VM. Older age, longer symptom duration before the visit, lower serum sodium, lower cerebrospinal fluid (CSF) glucose, higher CSF protein, and CSF adenosine deaminase were found in the TBM patients. Among the various machine-learning algorithms, the area under the curve (AUC) of the receiver operating characteristics of artificial neural network (ANN) with ImperativeImputer for matrix completion (0.85; 95% confidence interval 0.79 - 0.89) was found to be the highest. The AUC of the ANN model was statistically higher than those of all the residents (range 0.67 - 0.72, P <0.001) and an infectious disease specialist (AUC 0.76; P = 0.03). CONCLUSION: The machine-learning techniques may play a role in differentiating between TBM and VM. Specifically, the ANN model seems to have better diagnostic performance than the non-expert clinician.
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spelling pubmed-80329122021-04-15 Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis Jeong, Young-Seob Jeon, Minjun Park, Joung Ha Kim, Min-Chul Lee, Eunyoung Park, Se Yoon Lee, Yu-Mi Choi, Sungim Park, Seong Yeon Park, Ki-Ho Kim, Sung-Han Jeon, Min Huok Choo, Eun Ju Kim, Tae Hyong Lee, Mi Suk Kim, Tark Infect Chemother Original Article BACKGROUND: Tuberculous meningitis (TBM) is the most severe form of tuberculosis, but differentiating between the diagnosis of TBM and viral meningitis (VM) is difficult. Thus, we have developed machine-learning modules for differentiating TBM from VM. MATERIAL AND METHODS: For the training data, confirmed or probable TBM and confirmed VM cases were retrospectively collected from five teaching hospitals in Korea between January 2000 - July 2018. Various machine-learning algorithms were used for training. The machine-learning algorithms were tested by the leave-one-out cross-validation. Four residents and two infectious disease specialists were tested using the summarized medical information. RESULTS: The training study comprised data from 60 patients with confirmed or probable TBM and 143 patients with confirmed VM. Older age, longer symptom duration before the visit, lower serum sodium, lower cerebrospinal fluid (CSF) glucose, higher CSF protein, and CSF adenosine deaminase were found in the TBM patients. Among the various machine-learning algorithms, the area under the curve (AUC) of the receiver operating characteristics of artificial neural network (ANN) with ImperativeImputer for matrix completion (0.85; 95% confidence interval 0.79 - 0.89) was found to be the highest. The AUC of the ANN model was statistically higher than those of all the residents (range 0.67 - 0.72, P <0.001) and an infectious disease specialist (AUC 0.76; P = 0.03). CONCLUSION: The machine-learning techniques may play a role in differentiating between TBM and VM. Specifically, the ANN model seems to have better diagnostic performance than the non-expert clinician. The Korean Society of Infectious Diseases; Korean Society for Antimicrobial Therapy; The Korean Society for AIDS 2021-03 2020-12-11 /pmc/articles/PMC8032912/ /pubmed/33538134 http://dx.doi.org/10.3947/ic.2020.0104 Text en Copyright © 2021 by The Korean Society of Infectious Diseases, Korean Society for Antimicrobial Therapy, and The Korean Society for AIDS https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Jeong, Young-Seob
Jeon, Minjun
Park, Joung Ha
Kim, Min-Chul
Lee, Eunyoung
Park, Se Yoon
Lee, Yu-Mi
Choi, Sungim
Park, Seong Yeon
Park, Ki-Ho
Kim, Sung-Han
Jeon, Min Huok
Choo, Eun Ju
Kim, Tae Hyong
Lee, Mi Suk
Kim, Tark
Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis
title Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis
title_full Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis
title_fullStr Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis
title_full_unstemmed Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis
title_short Machine-Learning-Based Approach to Differential Diagnosis in Tuberculous and Viral Meningitis
title_sort machine-learning-based approach to differential diagnosis in tuberculous and viral meningitis
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8032912/
https://www.ncbi.nlm.nih.gov/pubmed/33538134
http://dx.doi.org/10.3947/ic.2020.0104
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