Cargando…

Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot

The Dynamic model has been described as one of the most accurate models to quantify chill accumulation based on hourly temperatures in nuts and temperate fruits. This model considers that a dynamic process occurs at a biochemical level that determines the endodormancy breaking through the accumulati...

Descripción completa

Detalles Bibliográficos
Autores principales: Egea, Jose A, Egea, José, Ruiz, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8033249/
https://www.ncbi.nlm.nih.gov/pubmed/32348498
http://dx.doi.org/10.1093/treephys/tpaa054
_version_ 1783676375334387712
author Egea, Jose A
Egea, José
Ruiz, David
author_facet Egea, Jose A
Egea, José
Ruiz, David
author_sort Egea, Jose A
collection PubMed
description The Dynamic model has been described as one of the most accurate models to quantify chill accumulation based on hourly temperatures in nuts and temperate fruits. This model considers that a dynamic process occurs at a biochemical level that determines the endodormancy breaking through the accumulation of the so-called portions. The kinetic parameters present in the model should reflect how the fruit trees integrate chilling exposure and thus they should be characteristic for each species. However, the original parameter values, reported in the late 1980s, are still being used. Even if the use of such parameter values is useful to compare among chilling requirements (CRs) for different species or cultivars, it is not the optimal choice when one intends to explain the CR variations in different years for a given cultivar. In this work we propose a data-based model calibration that makes use of phenological data for different apricot cultivars within different years to obtain model parameters, which minimize the variations among years and that have, at the same time, physical meaning to characterize the incumbent species. Results reveal that the estimation not only reduces the accumulated portion dispersion within the considered time periods but also allows to improve the CR predictions for subsequent years. We propose a set of model parameter values to predict endodormancy breaking dates in the apricot cultivars studied here.
format Online
Article
Text
id pubmed-8033249
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-80332492021-04-14 Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot Egea, Jose A Egea, José Ruiz, David Tree Physiol Methods Paper The Dynamic model has been described as one of the most accurate models to quantify chill accumulation based on hourly temperatures in nuts and temperate fruits. This model considers that a dynamic process occurs at a biochemical level that determines the endodormancy breaking through the accumulation of the so-called portions. The kinetic parameters present in the model should reflect how the fruit trees integrate chilling exposure and thus they should be characteristic for each species. However, the original parameter values, reported in the late 1980s, are still being used. Even if the use of such parameter values is useful to compare among chilling requirements (CRs) for different species or cultivars, it is not the optimal choice when one intends to explain the CR variations in different years for a given cultivar. In this work we propose a data-based model calibration that makes use of phenological data for different apricot cultivars within different years to obtain model parameters, which minimize the variations among years and that have, at the same time, physical meaning to characterize the incumbent species. Results reveal that the estimation not only reduces the accumulated portion dispersion within the considered time periods but also allows to improve the CR predictions for subsequent years. We propose a set of model parameter values to predict endodormancy breaking dates in the apricot cultivars studied here. Oxford University Press 2020-04-27 /pmc/articles/PMC8033249/ /pubmed/32348498 http://dx.doi.org/10.1093/treephys/tpaa054 Text en © The Author(s) 2020. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Methods Paper
Egea, Jose A
Egea, José
Ruiz, David
Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot
title Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot
title_full Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot
title_fullStr Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot
title_full_unstemmed Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot
title_short Reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot
title_sort reducing the uncertainty on chilling requirements for endodormancy breaking of temperate fruits by data-based parameter estimation of the dynamic model: a test case in apricot
topic Methods Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8033249/
https://www.ncbi.nlm.nih.gov/pubmed/32348498
http://dx.doi.org/10.1093/treephys/tpaa054
work_keys_str_mv AT egeajosea reducingtheuncertaintyonchillingrequirementsforendodormancybreakingoftemperatefruitsbydatabasedparameterestimationofthedynamicmodelatestcaseinapricot
AT egeajose reducingtheuncertaintyonchillingrequirementsforendodormancybreakingoftemperatefruitsbydatabasedparameterestimationofthedynamicmodelatestcaseinapricot
AT ruizdavid reducingtheuncertaintyonchillingrequirementsforendodormancybreakingoftemperatefruitsbydatabasedparameterestimationofthedynamicmodelatestcaseinapricot