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An immunoscore nomogram for predicting survival in patients with oesophageal cancer

This study aimed to construct and validate an immunoscore nomogram that may be used to predict the prognosis of oesophageal cancer. With the gene expression data of oesophageal cancer in a public database, we used CIBERSORT to estimate the fractions of 22 infiltrating immune cell types. We then buil...

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Autores principales: Li, Gaoming, Song, Qiuyue, Cai, Angsong, Wei, Zeliang, Zhang, Rui, Yi, Dali, Chen, Jia, Li, Fang, Zhang, Yanqi, Liu, Ling, Wu, Yazhou, Yi, Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8034926/
https://www.ncbi.nlm.nih.gov/pubmed/33714960
http://dx.doi.org/10.18632/aging.202686
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author Li, Gaoming
Song, Qiuyue
Cai, Angsong
Wei, Zeliang
Zhang, Rui
Yi, Dali
Chen, Jia
Li, Fang
Zhang, Yanqi
Liu, Ling
Wu, Yazhou
Yi, Dong
author_facet Li, Gaoming
Song, Qiuyue
Cai, Angsong
Wei, Zeliang
Zhang, Rui
Yi, Dali
Chen, Jia
Li, Fang
Zhang, Yanqi
Liu, Ling
Wu, Yazhou
Yi, Dong
author_sort Li, Gaoming
collection PubMed
description This study aimed to construct and validate an immunoscore nomogram that may be used to predict the prognosis of oesophageal cancer. With the gene expression data of oesophageal cancer in a public database, we used CIBERSORT to estimate the fractions of 22 infiltrating immune cell types. We then built an immunoscore signature based on 12 types of infiltrating immune cells using the least absolute shrinkage and selection operator (LASSO) model. This immunoscore was used as an independent predictor in the prognostic model (training cohort: [hazard ratio (HR), 4.78; 95% confidence interval (CI), 2.64-8.67; P < 0.001], validation cohort: [HR, 2.15; 95% CI, 1.04-4.45; P = 0.040]). Subgroup analysis by clinical features showed that overall survival was significantly different between the high-immunoscore group and the low-immunoscore group. The predictors that constituted the individualized prediction nomogram were immunoscore, age, and tumour stage. The nomogram had good discrimination and calibration. Decision curve analysis showed that the immunoscore nomogram was clinically useful. Therefore, the novel immunoscore signature based on infiltrating immune cells can be used as a reliable predictor of the prognosis of oesophageal cancer, and the immunoscore nomogram is a convenient tool for predicting the survival of individual patients.
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spelling pubmed-80349262021-04-16 An immunoscore nomogram for predicting survival in patients with oesophageal cancer Li, Gaoming Song, Qiuyue Cai, Angsong Wei, Zeliang Zhang, Rui Yi, Dali Chen, Jia Li, Fang Zhang, Yanqi Liu, Ling Wu, Yazhou Yi, Dong Aging (Albany NY) Research Paper This study aimed to construct and validate an immunoscore nomogram that may be used to predict the prognosis of oesophageal cancer. With the gene expression data of oesophageal cancer in a public database, we used CIBERSORT to estimate the fractions of 22 infiltrating immune cell types. We then built an immunoscore signature based on 12 types of infiltrating immune cells using the least absolute shrinkage and selection operator (LASSO) model. This immunoscore was used as an independent predictor in the prognostic model (training cohort: [hazard ratio (HR), 4.78; 95% confidence interval (CI), 2.64-8.67; P < 0.001], validation cohort: [HR, 2.15; 95% CI, 1.04-4.45; P = 0.040]). Subgroup analysis by clinical features showed that overall survival was significantly different between the high-immunoscore group and the low-immunoscore group. The predictors that constituted the individualized prediction nomogram were immunoscore, age, and tumour stage. The nomogram had good discrimination and calibration. Decision curve analysis showed that the immunoscore nomogram was clinically useful. Therefore, the novel immunoscore signature based on infiltrating immune cells can be used as a reliable predictor of the prognosis of oesophageal cancer, and the immunoscore nomogram is a convenient tool for predicting the survival of individual patients. Impact Journals 2021-03-10 /pmc/articles/PMC8034926/ /pubmed/33714960 http://dx.doi.org/10.18632/aging.202686 Text en Copyright: © 2021 Li et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Li, Gaoming
Song, Qiuyue
Cai, Angsong
Wei, Zeliang
Zhang, Rui
Yi, Dali
Chen, Jia
Li, Fang
Zhang, Yanqi
Liu, Ling
Wu, Yazhou
Yi, Dong
An immunoscore nomogram for predicting survival in patients with oesophageal cancer
title An immunoscore nomogram for predicting survival in patients with oesophageal cancer
title_full An immunoscore nomogram for predicting survival in patients with oesophageal cancer
title_fullStr An immunoscore nomogram for predicting survival in patients with oesophageal cancer
title_full_unstemmed An immunoscore nomogram for predicting survival in patients with oesophageal cancer
title_short An immunoscore nomogram for predicting survival in patients with oesophageal cancer
title_sort immunoscore nomogram for predicting survival in patients with oesophageal cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8034926/
https://www.ncbi.nlm.nih.gov/pubmed/33714960
http://dx.doi.org/10.18632/aging.202686
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