Cargando…
An immunoscore nomogram for predicting survival in patients with oesophageal cancer
This study aimed to construct and validate an immunoscore nomogram that may be used to predict the prognosis of oesophageal cancer. With the gene expression data of oesophageal cancer in a public database, we used CIBERSORT to estimate the fractions of 22 infiltrating immune cell types. We then buil...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8034926/ https://www.ncbi.nlm.nih.gov/pubmed/33714960 http://dx.doi.org/10.18632/aging.202686 |
_version_ | 1783676621294665728 |
---|---|
author | Li, Gaoming Song, Qiuyue Cai, Angsong Wei, Zeliang Zhang, Rui Yi, Dali Chen, Jia Li, Fang Zhang, Yanqi Liu, Ling Wu, Yazhou Yi, Dong |
author_facet | Li, Gaoming Song, Qiuyue Cai, Angsong Wei, Zeliang Zhang, Rui Yi, Dali Chen, Jia Li, Fang Zhang, Yanqi Liu, Ling Wu, Yazhou Yi, Dong |
author_sort | Li, Gaoming |
collection | PubMed |
description | This study aimed to construct and validate an immunoscore nomogram that may be used to predict the prognosis of oesophageal cancer. With the gene expression data of oesophageal cancer in a public database, we used CIBERSORT to estimate the fractions of 22 infiltrating immune cell types. We then built an immunoscore signature based on 12 types of infiltrating immune cells using the least absolute shrinkage and selection operator (LASSO) model. This immunoscore was used as an independent predictor in the prognostic model (training cohort: [hazard ratio (HR), 4.78; 95% confidence interval (CI), 2.64-8.67; P < 0.001], validation cohort: [HR, 2.15; 95% CI, 1.04-4.45; P = 0.040]). Subgroup analysis by clinical features showed that overall survival was significantly different between the high-immunoscore group and the low-immunoscore group. The predictors that constituted the individualized prediction nomogram were immunoscore, age, and tumour stage. The nomogram had good discrimination and calibration. Decision curve analysis showed that the immunoscore nomogram was clinically useful. Therefore, the novel immunoscore signature based on infiltrating immune cells can be used as a reliable predictor of the prognosis of oesophageal cancer, and the immunoscore nomogram is a convenient tool for predicting the survival of individual patients. |
format | Online Article Text |
id | pubmed-8034926 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-80349262021-04-16 An immunoscore nomogram for predicting survival in patients with oesophageal cancer Li, Gaoming Song, Qiuyue Cai, Angsong Wei, Zeliang Zhang, Rui Yi, Dali Chen, Jia Li, Fang Zhang, Yanqi Liu, Ling Wu, Yazhou Yi, Dong Aging (Albany NY) Research Paper This study aimed to construct and validate an immunoscore nomogram that may be used to predict the prognosis of oesophageal cancer. With the gene expression data of oesophageal cancer in a public database, we used CIBERSORT to estimate the fractions of 22 infiltrating immune cell types. We then built an immunoscore signature based on 12 types of infiltrating immune cells using the least absolute shrinkage and selection operator (LASSO) model. This immunoscore was used as an independent predictor in the prognostic model (training cohort: [hazard ratio (HR), 4.78; 95% confidence interval (CI), 2.64-8.67; P < 0.001], validation cohort: [HR, 2.15; 95% CI, 1.04-4.45; P = 0.040]). Subgroup analysis by clinical features showed that overall survival was significantly different between the high-immunoscore group and the low-immunoscore group. The predictors that constituted the individualized prediction nomogram were immunoscore, age, and tumour stage. The nomogram had good discrimination and calibration. Decision curve analysis showed that the immunoscore nomogram was clinically useful. Therefore, the novel immunoscore signature based on infiltrating immune cells can be used as a reliable predictor of the prognosis of oesophageal cancer, and the immunoscore nomogram is a convenient tool for predicting the survival of individual patients. Impact Journals 2021-03-10 /pmc/articles/PMC8034926/ /pubmed/33714960 http://dx.doi.org/10.18632/aging.202686 Text en Copyright: © 2021 Li et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Li, Gaoming Song, Qiuyue Cai, Angsong Wei, Zeliang Zhang, Rui Yi, Dali Chen, Jia Li, Fang Zhang, Yanqi Liu, Ling Wu, Yazhou Yi, Dong An immunoscore nomogram for predicting survival in patients with oesophageal cancer |
title | An immunoscore nomogram for predicting survival in patients with oesophageal cancer |
title_full | An immunoscore nomogram for predicting survival in patients with oesophageal cancer |
title_fullStr | An immunoscore nomogram for predicting survival in patients with oesophageal cancer |
title_full_unstemmed | An immunoscore nomogram for predicting survival in patients with oesophageal cancer |
title_short | An immunoscore nomogram for predicting survival in patients with oesophageal cancer |
title_sort | immunoscore nomogram for predicting survival in patients with oesophageal cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8034926/ https://www.ncbi.nlm.nih.gov/pubmed/33714960 http://dx.doi.org/10.18632/aging.202686 |
work_keys_str_mv | AT ligaoming animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT songqiuyue animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT caiangsong animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT weizeliang animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT zhangrui animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT yidali animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT chenjia animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT lifang animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT zhangyanqi animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT liuling animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT wuyazhou animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT yidong animmunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT ligaoming immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT songqiuyue immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT caiangsong immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT weizeliang immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT zhangrui immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT yidali immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT chenjia immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT lifang immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT zhangyanqi immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT liuling immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT wuyazhou immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer AT yidong immunoscorenomogramforpredictingsurvivalinpatientswithoesophagealcancer |