Cargando…

Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1

When combined with NMR spectroscopy, high hydrostatic pressure is an alternative perturbation method used to destabilize globular proteins that has proven to be particularly well suited for exploring the unfolding energy landscape of small single-domain proteins. To date, investigations of the unfol...

Descripción completa

Detalles Bibliográficos
Autores principales: Dubois, Cécile, Planelles-Herrero, Vicente J., Tillatte-Tripodi, Camille, Delbecq, Stéphane, Mammri, Léa, Sirkia, Elena M., Ropars, Virginie, Roumestand, Christian, Barthe, Philippe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8037465/
https://www.ncbi.nlm.nih.gov/pubmed/33808390
http://dx.doi.org/10.3390/ijms22073597
_version_ 1783677150000316416
author Dubois, Cécile
Planelles-Herrero, Vicente J.
Tillatte-Tripodi, Camille
Delbecq, Stéphane
Mammri, Léa
Sirkia, Elena M.
Ropars, Virginie
Roumestand, Christian
Barthe, Philippe
author_facet Dubois, Cécile
Planelles-Herrero, Vicente J.
Tillatte-Tripodi, Camille
Delbecq, Stéphane
Mammri, Léa
Sirkia, Elena M.
Ropars, Virginie
Roumestand, Christian
Barthe, Philippe
author_sort Dubois, Cécile
collection PubMed
description When combined with NMR spectroscopy, high hydrostatic pressure is an alternative perturbation method used to destabilize globular proteins that has proven to be particularly well suited for exploring the unfolding energy landscape of small single-domain proteins. To date, investigations of the unfolding landscape of all-β or mixed-α/β protein scaffolds are well documented, whereas such data are lacking for all-α protein domains. Here we report the NMR study of the unfolding pathways of GIPC1-GH2, a small α-helical bundle domain made of four antiparallel α-helices. High-pressure perturbation was combined with NMR spectroscopy to unravel the unfolding landscape at three different temperatures. The results were compared to those obtained from classical chemical denaturation. Whatever the perturbation used, the loss of secondary and tertiary contacts within the protein scaffold is almost simultaneous. The unfolding transition appeared very cooperative when using high pressure at high temperature, as was the case for chemical denaturation, whereas it was found more progressive at low temperature, suggesting the existence of a complex folding pathway.
format Online
Article
Text
id pubmed-8037465
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-80374652021-04-12 Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1 Dubois, Cécile Planelles-Herrero, Vicente J. Tillatte-Tripodi, Camille Delbecq, Stéphane Mammri, Léa Sirkia, Elena M. Ropars, Virginie Roumestand, Christian Barthe, Philippe Int J Mol Sci Article When combined with NMR spectroscopy, high hydrostatic pressure is an alternative perturbation method used to destabilize globular proteins that has proven to be particularly well suited for exploring the unfolding energy landscape of small single-domain proteins. To date, investigations of the unfolding landscape of all-β or mixed-α/β protein scaffolds are well documented, whereas such data are lacking for all-α protein domains. Here we report the NMR study of the unfolding pathways of GIPC1-GH2, a small α-helical bundle domain made of four antiparallel α-helices. High-pressure perturbation was combined with NMR spectroscopy to unravel the unfolding landscape at three different temperatures. The results were compared to those obtained from classical chemical denaturation. Whatever the perturbation used, the loss of secondary and tertiary contacts within the protein scaffold is almost simultaneous. The unfolding transition appeared very cooperative when using high pressure at high temperature, as was the case for chemical denaturation, whereas it was found more progressive at low temperature, suggesting the existence of a complex folding pathway. MDPI 2021-03-30 /pmc/articles/PMC8037465/ /pubmed/33808390 http://dx.doi.org/10.3390/ijms22073597 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dubois, Cécile
Planelles-Herrero, Vicente J.
Tillatte-Tripodi, Camille
Delbecq, Stéphane
Mammri, Léa
Sirkia, Elena M.
Ropars, Virginie
Roumestand, Christian
Barthe, Philippe
Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1
title Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1
title_full Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1
title_fullStr Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1
title_full_unstemmed Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1
title_short Pressure and Chemical Unfolding of an α-Helical Bundle Protein: The GH2 Domain of the Protein Adaptor GIPC1
title_sort pressure and chemical unfolding of an α-helical bundle protein: the gh2 domain of the protein adaptor gipc1
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8037465/
https://www.ncbi.nlm.nih.gov/pubmed/33808390
http://dx.doi.org/10.3390/ijms22073597
work_keys_str_mv AT duboiscecile pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT planellesherrerovicentej pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT tillattetripodicamille pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT delbecqstephane pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT mammrilea pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT sirkiaelenam pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT roparsvirginie pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT roumestandchristian pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1
AT barthephilippe pressureandchemicalunfoldingofanahelicalbundleproteinthegh2domainoftheproteinadaptorgipc1