Cargando…

Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor

A molecular docking approach was employed to evaluate the binding affinity of six triterpenes, namely epifriedelanol, friedelin, α-amyrin, α-amyrin acetate, β-amyrin acetate, and bauerenyl acetate, towards the cannabinoid type 1 receptor (CB1). Molecular docking studies showed that friedelin, α-amyr...

Descripción completa

Detalles Bibliográficos
Autores principales: Siraj, Md Afjalus, Rahman, Md. Sajjadur, Tan, Ghee T., Seidel, Veronique
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8038099/
https://www.ncbi.nlm.nih.gov/pubmed/33808384
http://dx.doi.org/10.3390/ijms22073595
_version_ 1783677296997040128
author Siraj, Md Afjalus
Rahman, Md. Sajjadur
Tan, Ghee T.
Seidel, Veronique
author_facet Siraj, Md Afjalus
Rahman, Md. Sajjadur
Tan, Ghee T.
Seidel, Veronique
author_sort Siraj, Md Afjalus
collection PubMed
description A molecular docking approach was employed to evaluate the binding affinity of six triterpenes, namely epifriedelanol, friedelin, α-amyrin, α-amyrin acetate, β-amyrin acetate, and bauerenyl acetate, towards the cannabinoid type 1 receptor (CB1). Molecular docking studies showed that friedelin, α-amyrin, and epifriedelanol had the strongest binding affinity towards CB1. Molecular dynamics simulation studies revealed that friedelin and α-amyrin engaged in stable non-bonding interactions by binding to a pocket close to the active site on the surface of the CB1 target protein. The studied triterpenes showed a good capacity to penetrate the blood–brain barrier. These results help to provide some evidence to justify, at least in part, the previously reported antinociceptive and sedative properties of Vernonia patula.
format Online
Article
Text
id pubmed-8038099
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-80380992021-04-12 Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor Siraj, Md Afjalus Rahman, Md. Sajjadur Tan, Ghee T. Seidel, Veronique Int J Mol Sci Article A molecular docking approach was employed to evaluate the binding affinity of six triterpenes, namely epifriedelanol, friedelin, α-amyrin, α-amyrin acetate, β-amyrin acetate, and bauerenyl acetate, towards the cannabinoid type 1 receptor (CB1). Molecular docking studies showed that friedelin, α-amyrin, and epifriedelanol had the strongest binding affinity towards CB1. Molecular dynamics simulation studies revealed that friedelin and α-amyrin engaged in stable non-bonding interactions by binding to a pocket close to the active site on the surface of the CB1 target protein. The studied triterpenes showed a good capacity to penetrate the blood–brain barrier. These results help to provide some evidence to justify, at least in part, the previously reported antinociceptive and sedative properties of Vernonia patula. MDPI 2021-03-30 /pmc/articles/PMC8038099/ /pubmed/33808384 http://dx.doi.org/10.3390/ijms22073595 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Siraj, Md Afjalus
Rahman, Md. Sajjadur
Tan, Ghee T.
Seidel, Veronique
Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor
title Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor
title_full Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor
title_fullStr Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor
title_full_unstemmed Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor
title_short Molecular Docking and Molecular Dynamics Simulation Studies of Triterpenes from Vernonia patula with the Cannabinoid Type 1 Receptor
title_sort molecular docking and molecular dynamics simulation studies of triterpenes from vernonia patula with the cannabinoid type 1 receptor
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8038099/
https://www.ncbi.nlm.nih.gov/pubmed/33808384
http://dx.doi.org/10.3390/ijms22073595
work_keys_str_mv AT sirajmdafjalus moleculardockingandmoleculardynamicssimulationstudiesoftriterpenesfromvernoniapatulawiththecannabinoidtype1receptor
AT rahmanmdsajjadur moleculardockingandmoleculardynamicssimulationstudiesoftriterpenesfromvernoniapatulawiththecannabinoidtype1receptor
AT tangheet moleculardockingandmoleculardynamicssimulationstudiesoftriterpenesfromvernoniapatulawiththecannabinoidtype1receptor
AT seidelveronique moleculardockingandmoleculardynamicssimulationstudiesoftriterpenesfromvernoniapatulawiththecannabinoidtype1receptor