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Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering

The coordination properties of four hy­droxy­pyri­dine­carboxyl­ates, designed for the treatment of iron-overloading con­ditions as bidentate O,O′-donor ligands, have been studied with Zn(II) in the solid state. The coordination com­pounds [Zn(A1)(2)(H(2)O)(2)] (1), [Zn(A2)(2)(H(2)O)] (2), [Zn(A3)(2...

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Autores principales: May, Nóra Veronika, Nys, Kevin, Ching, H. Y. Vincent, Bereczki, Laura, Holczbauer, Tamás, Di Marco, Valerio B., Bombicz, Petra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040096/
https://www.ncbi.nlm.nih.gov/pubmed/33843726
http://dx.doi.org/10.1107/S2052520621000299
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author May, Nóra Veronika
Nys, Kevin
Ching, H. Y. Vincent
Bereczki, Laura
Holczbauer, Tamás
Di Marco, Valerio B.
Bombicz, Petra
author_facet May, Nóra Veronika
Nys, Kevin
Ching, H. Y. Vincent
Bereczki, Laura
Holczbauer, Tamás
Di Marco, Valerio B.
Bombicz, Petra
author_sort May, Nóra Veronika
collection PubMed
description The coordination properties of four hy­droxy­pyri­dine­carboxyl­ates, designed for the treatment of iron-overloading con­ditions as bidentate O,O′-donor ligands, have been studied with Zn(II) in the solid state. The coordination com­pounds [Zn(A1)(2)(H(2)O)(2)] (1), [Zn(A2)(2)(H(2)O)] (2), [Zn(A3)(2)(H(2)O)]·2H(2)O (3) and [Zn(2)(B1)(4)(H(2)O)(2)]·4H(2)O (4), where the ligands are 1-methyl-4-oxidopyridinium-3-­carboxyl­ate (A1, C(7)H(6)NO(3)), 1,6-di­methyl-4-oxidopyridinium-3-carboxyl­ate (A2, C(8)H(8)NO(3)), 1,5-di­methyl-4-oxido-pyridinium-3-carboxyl­ate (A3, C(8)H(8)NO(3)) and 1-methyl-3-oxidopyridinium-4-carboxyl­ate (B1, C(7)H(6)NO(3)), have been synthesized and analysed by single-crystal X-ray diffraction. The ligands were chosen to probe (i) the electronic effects of inverting the positions of the O-atom donor groups (i.e. A1 versus B1) and (ii) the electronic and steric effects of the addition of a second methyl group in different positions on the pyri­dine ring. Two axially coordinated water molecules resulting in a six-coordinated symmetrical octahedron com­plement the bis-ligand com­plex of A1. Ligands A2 and A3 form five-coordinated trigonal bipyramidal com­plexes with one additional water molecule in the coordination sphere, which is a rarely reported geometry for Zn(II) com­plexes. Ligand B1 shows a dimeric structure, where the two Zn(2+) dications have slightly distorted octahedral geometry and the pyridino­late O atom of the neighbouring com­plex bridges them. The coordination spheres of the Zn(2+) dications and the supramolecular structures are discussed in detail. The packing arrangements of 1–3 are similar, having alternating hydro­philic and hydro­phobic layers, however the similarity is broken in 4. The obtained coordination geometries are com­pared with their previously determined Cu(II) analogues. The study of the individual com­plexes is com­plemented with a com­prehensive analysis of Zn(II) com­plexes with oxygen donor ligands with data from the Cambridge Structural Database.
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spelling pubmed-80400962021-05-04 Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering May, Nóra Veronika Nys, Kevin Ching, H. Y. Vincent Bereczki, Laura Holczbauer, Tamás Di Marco, Valerio B. Bombicz, Petra Acta Crystallogr B Struct Sci Cryst Eng Mater Research Papers The coordination properties of four hy­droxy­pyri­dine­carboxyl­ates, designed for the treatment of iron-overloading con­ditions as bidentate O,O′-donor ligands, have been studied with Zn(II) in the solid state. The coordination com­pounds [Zn(A1)(2)(H(2)O)(2)] (1), [Zn(A2)(2)(H(2)O)] (2), [Zn(A3)(2)(H(2)O)]·2H(2)O (3) and [Zn(2)(B1)(4)(H(2)O)(2)]·4H(2)O (4), where the ligands are 1-methyl-4-oxidopyridinium-3-­carboxyl­ate (A1, C(7)H(6)NO(3)), 1,6-di­methyl-4-oxidopyridinium-3-carboxyl­ate (A2, C(8)H(8)NO(3)), 1,5-di­methyl-4-oxido-pyridinium-3-carboxyl­ate (A3, C(8)H(8)NO(3)) and 1-methyl-3-oxidopyridinium-4-carboxyl­ate (B1, C(7)H(6)NO(3)), have been synthesized and analysed by single-crystal X-ray diffraction. The ligands were chosen to probe (i) the electronic effects of inverting the positions of the O-atom donor groups (i.e. A1 versus B1) and (ii) the electronic and steric effects of the addition of a second methyl group in different positions on the pyri­dine ring. Two axially coordinated water molecules resulting in a six-coordinated symmetrical octahedron com­plement the bis-ligand com­plex of A1. Ligands A2 and A3 form five-coordinated trigonal bipyramidal com­plexes with one additional water molecule in the coordination sphere, which is a rarely reported geometry for Zn(II) com­plexes. Ligand B1 shows a dimeric structure, where the two Zn(2+) dications have slightly distorted octahedral geometry and the pyridino­late O atom of the neighbouring com­plex bridges them. The coordination spheres of the Zn(2+) dications and the supramolecular structures are discussed in detail. The packing arrangements of 1–3 are similar, having alternating hydro­philic and hydro­phobic layers, however the similarity is broken in 4. The obtained coordination geometries are com­pared with their previously determined Cu(II) analogues. The study of the individual com­plexes is com­plemented with a com­prehensive analysis of Zn(II) com­plexes with oxygen donor ligands with data from the Cambridge Structural Database. International Union of Crystallography 2021-02-27 /pmc/articles/PMC8040096/ /pubmed/33843726 http://dx.doi.org/10.1107/S2052520621000299 Text en © Nóra Veronika May et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
May, Nóra Veronika
Nys, Kevin
Ching, H. Y. Vincent
Bereczki, Laura
Holczbauer, Tamás
Di Marco, Valerio B.
Bombicz, Petra
Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering
title Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering
title_full Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering
title_fullStr Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering
title_full_unstemmed Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering
title_short Crystal structures of zinc(II) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering
title_sort crystal structures of zinc(ii) com­plexes with β-hy­droxy­pyri­dine­carboxyl­ate ligands: examples of structure-directing effects used in inorganic crystal engineering
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040096/
https://www.ncbi.nlm.nih.gov/pubmed/33843726
http://dx.doi.org/10.1107/S2052520621000299
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