Cargando…

A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)

Camacolaimidae is a clade of nematodes that include both free-living epistrate feeding forms and parasites of marine protozoans and invertebrates. Neocamacolaimus parasiticus is a parasite of marine polychaete worms. Given its phylogenetic affinities to free-living species, Neocamacolaimus can be a...

Descripción completa

Detalles Bibliográficos
Autores principales: Ahmed, Mohammed, Adedidran, Funmilola, Holovachov, Oleksandr
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Exeley Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040144/
https://www.ncbi.nlm.nih.gov/pubmed/33860270
http://dx.doi.org/10.21307/jofnem-2021-040
_version_ 1783677727648251904
author Ahmed, Mohammed
Adedidran, Funmilola
Holovachov, Oleksandr
author_facet Ahmed, Mohammed
Adedidran, Funmilola
Holovachov, Oleksandr
author_sort Ahmed, Mohammed
collection PubMed
description Camacolaimidae is a clade of nematodes that include both free-living epistrate feeding forms and parasites of marine protozoans and invertebrates. Neocamacolaimus parasiticus is a parasite of marine polychaete worms. Given its phylogenetic affinities to free-living species, Neocamacolaimus can be a reference for research of the origin of parasitism in an aquatic environment. Here, we present a draft transcriptome obtained from a single post-parasitic juvenile individual of this species. The final assembly consists of 19,180 protein coding sequences (including isoforms) with the following BUSCO scores for Nematoda: 65.38% complete, 9.06% partial, and 25.56% missing, and for Metazoa: 79.45% complete, 3.17% partial, and 17.38% missing.
format Online
Article
Text
id pubmed-8040144
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Exeley Inc.
record_format MEDLINE/PubMed
spelling pubmed-80401442021-04-14 A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) Ahmed, Mohammed Adedidran, Funmilola Holovachov, Oleksandr J Nematol Arts & Humanities Camacolaimidae is a clade of nematodes that include both free-living epistrate feeding forms and parasites of marine protozoans and invertebrates. Neocamacolaimus parasiticus is a parasite of marine polychaete worms. Given its phylogenetic affinities to free-living species, Neocamacolaimus can be a reference for research of the origin of parasitism in an aquatic environment. Here, we present a draft transcriptome obtained from a single post-parasitic juvenile individual of this species. The final assembly consists of 19,180 protein coding sequences (including isoforms) with the following BUSCO scores for Nematoda: 65.38% complete, 9.06% partial, and 25.56% missing, and for Metazoa: 79.45% complete, 3.17% partial, and 17.38% missing. Exeley Inc. 2021-04-01 /pmc/articles/PMC8040144/ /pubmed/33860270 http://dx.doi.org/10.21307/jofnem-2021-040 Text en © 2021 Authors https://creativecommons.org/licenses/by/4.0/This is an Open Access article licensed under the Creative Commons CC BY 4.0 license, https://creativecommons.org/licenses/by/4.0/
spellingShingle Arts & Humanities
Ahmed, Mohammed
Adedidran, Funmilola
Holovachov, Oleksandr
A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
title A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
title_full A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
title_fullStr A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
title_full_unstemmed A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
title_short A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
title_sort draft transcriptome of a parasite neocamacolaimus parasiticus (camacolaimidae, plectida)
topic Arts & Humanities
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040144/
https://www.ncbi.nlm.nih.gov/pubmed/33860270
http://dx.doi.org/10.21307/jofnem-2021-040
work_keys_str_mv AT ahmedmohammed adrafttranscriptomeofaparasiteneocamacolaimusparasiticuscamacolaimidaeplectida
AT adedidranfunmilola adrafttranscriptomeofaparasiteneocamacolaimusparasiticuscamacolaimidaeplectida
AT holovachovoleksandr adrafttranscriptomeofaparasiteneocamacolaimusparasiticuscamacolaimidaeplectida
AT ahmedmohammed drafttranscriptomeofaparasiteneocamacolaimusparasiticuscamacolaimidaeplectida
AT adedidranfunmilola drafttranscriptomeofaparasiteneocamacolaimusparasiticuscamacolaimidaeplectida
AT holovachovoleksandr drafttranscriptomeofaparasiteneocamacolaimusparasiticuscamacolaimidaeplectida