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A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
Camacolaimidae is a clade of nematodes that include both free-living epistrate feeding forms and parasites of marine protozoans and invertebrates. Neocamacolaimus parasiticus is a parasite of marine polychaete worms. Given its phylogenetic affinities to free-living species, Neocamacolaimus can be a...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Exeley Inc.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040144/ https://www.ncbi.nlm.nih.gov/pubmed/33860270 http://dx.doi.org/10.21307/jofnem-2021-040 |
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author | Ahmed, Mohammed Adedidran, Funmilola Holovachov, Oleksandr |
author_facet | Ahmed, Mohammed Adedidran, Funmilola Holovachov, Oleksandr |
author_sort | Ahmed, Mohammed |
collection | PubMed |
description | Camacolaimidae is a clade of nematodes that include both free-living epistrate feeding forms and parasites of marine protozoans and invertebrates. Neocamacolaimus parasiticus is a parasite of marine polychaete worms. Given its phylogenetic affinities to free-living species, Neocamacolaimus can be a reference for research of the origin of parasitism in an aquatic environment. Here, we present a draft transcriptome obtained from a single post-parasitic juvenile individual of this species. The final assembly consists of 19,180 protein coding sequences (including isoforms) with the following BUSCO scores for Nematoda: 65.38% complete, 9.06% partial, and 25.56% missing, and for Metazoa: 79.45% complete, 3.17% partial, and 17.38% missing. |
format | Online Article Text |
id | pubmed-8040144 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Exeley Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80401442021-04-14 A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) Ahmed, Mohammed Adedidran, Funmilola Holovachov, Oleksandr J Nematol Arts & Humanities Camacolaimidae is a clade of nematodes that include both free-living epistrate feeding forms and parasites of marine protozoans and invertebrates. Neocamacolaimus parasiticus is a parasite of marine polychaete worms. Given its phylogenetic affinities to free-living species, Neocamacolaimus can be a reference for research of the origin of parasitism in an aquatic environment. Here, we present a draft transcriptome obtained from a single post-parasitic juvenile individual of this species. The final assembly consists of 19,180 protein coding sequences (including isoforms) with the following BUSCO scores for Nematoda: 65.38% complete, 9.06% partial, and 25.56% missing, and for Metazoa: 79.45% complete, 3.17% partial, and 17.38% missing. Exeley Inc. 2021-04-01 /pmc/articles/PMC8040144/ /pubmed/33860270 http://dx.doi.org/10.21307/jofnem-2021-040 Text en © 2021 Authors https://creativecommons.org/licenses/by/4.0/This is an Open Access article licensed under the Creative Commons CC BY 4.0 license, https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Arts & Humanities Ahmed, Mohammed Adedidran, Funmilola Holovachov, Oleksandr A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) |
title | A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) |
title_full | A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) |
title_fullStr | A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) |
title_full_unstemmed | A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) |
title_short | A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida) |
title_sort | draft transcriptome of a parasite neocamacolaimus parasiticus (camacolaimidae, plectida) |
topic | Arts & Humanities |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040144/ https://www.ncbi.nlm.nih.gov/pubmed/33860270 http://dx.doi.org/10.21307/jofnem-2021-040 |
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