Cargando…

Use of NAD tagSeq II to identify growth phase-dependent alterations in E. coli RNA NAD(+) capping

Recent findings regarding nicotinamide adenine dinucleotide (NAD(+))-capped RNAs (NAD-RNAs) indicate that prokaryotes and eukaryotes employ noncanonical RNA capping to regulate gene expression. Two methods for transcriptome-wide analysis of NAD-RNAs, NAD captureSeq and NAD tagSeq, are based on coppe...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Hailei, Zhong, Huan, Wang, Xufeng, Zhang, Shoudong, Shao, Xiaojian, Hu, Hao, Yu, Zhiling, Cai, Zongwei, Chen, Xuemei, Xia, Yiji
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	National Academy of Sciences 2021
Materias:	Biological Sciences
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040648/ https://www.ncbi.nlm.nih.gov/pubmed/33782135 http://dx.doi.org/10.1073/pnas.2026183118

Ejemplares similares

NAD tagSeq reveals that NAD(+)-capped RNAs are mostly produced from a large number of protein-coding genes in Arabidopsis
por: Zhang, Hailei, et al.
Publicado: (2019)

DpCoA tagSeq: Barcoding dpCoA-Capped RNA for Direct Nanopore Sequencing via Maleimide-Thiol Reaction
por: Shao, Xiaojian, et al.
Publicado: (2023)

NAD-seq for profiling the NAD(+) capped transcriptome of Arabidopsis thaliana
por: Yu, Xiang, et al.
Publicado: (2021)

TagSeq: Malicious behavior discovery using dynamic analysis
por: Huang, Yi-Ting, et al.
Publicado: (2022)

“NAD-capQ” detection and quantitation of NAD caps
por: Grudzien-Nogalska, Ewa, et al.
Publicado: (2018)

ONE-seq: epitranscriptome and gene-specific profiling of NAD-capped RNA
por: Niu, Kongyan, et al.
Publicado: (2022)

Xrn1 is a deNADding enzyme modulating mitochondrial NAD-capped RNA
por: Sharma, Sunny, et al.
Publicado: (2022)

CapZyme-Seq: A 5′-RNA-Seq Method for Differential Detection and Quantitation of NAD-Capped and Uncapped 5′-Triphosphate RNA
por: Vvedenskaya, Irina O., et al.
Publicado: (2020)

TagSeq for gene expression in non‐model plants: A pilot study at the Santa Rita Experimental Range NEON core site
por: Marx, Hannah E., et al.
Publicado: (2020)

The mechanism of RNA 5′ capping with NAD(+), NADH, and desphospho-CoA
por: Bird, Jeremy G., et al.
Publicado: (2016)

Metabolically distinct roles of NAD synthetase and NAD kinase define the essentiality of NAD and NADP in Mycobacterium tuberculosis
por: Sharma, Ritu, et al.
Publicado: (2023)

Cloning and Organelle Expression of Bamboo Mitochondrial Complex I Subunits Nad1, Nad2, Nad4, and Nad5 in the Yeast Saccharomyces cerevisiae
por: Tsai, Hsieh-Chin, et al.
Publicado: (2022)

NAD to the rescue
por: Tuma, Rabiya S.
Publicado: (2005)

NAD(+) Homeostasis and NAD(+)-Consuming Enzymes: Implications for Vascular Health
por: Campagna, Roberto, et al.
Publicado: (2023)

Implications of altered NAD metabolism in metabolic disorders
por: Okabe, Keisuke, et al.
Publicado: (2019)

Arabidopsis DXO1 activates RNMT1 to methylate the mRNA guanosine cap
por: Xiao, Chen, et al.
Publicado: (2023)

Quantification of localized NAD(+) changes reveals unique specificity of NAD(+) regulation in the hypothalamus
por: Johnson, Sean, et al.
Publicado: (2023)

Mitochondrial NAD kinase in health and disease
por: Zhang, Ren, et al.
Publicado: (2023)

Metabolic and Bactericidal Effects of Targeted Suppression of NadD and NadE Enzymes in Mycobacteria
por: Rodionova, Irina A., et al.
Publicado: (2014)

Evidence that the nadA motif is a bacterial riboswitch for the ubiquitous enzyme cofactor NAD(+)
por: Malkowski, Sarah N., et al.
Publicado: (2019)

The role of NAD and NAD precursors on longevity and lifespan modulation in the budding yeast, Saccharomyces cerevisiae
por: Odoh, Chuks Kenneth, et al.
Publicado: (2022)

SIRT1-dependent restoration of NAD+ homeostasis after increased extracellular NAD+ exposure
por: Buonvicino, Daniela, et al.
Publicado: (2021)

Dysregulated NAD(H) homeostasis associated with ciprofloxacin tolerance in Escherichia coli investigated on a single-cell level with the Peredox [NADH:NAD+] biosensor
por: Urbaniec, Joanna, et al.
Publicado: (2023)

Extensive 5′-surveillance guards against non-canonical NAD-caps of nuclear mRNAs in yeast
por: Zhang, Yaqing, et al.
Publicado: (2020)

NAD (+) biosynthesis, aging, and disease
por: Johnson, Sean, et al.
Publicado: (2018)

Decreased NAD+ in dopaminergic neurons
por: Sison, Samantha L., et al.
Publicado: (2018)

NAD Metabolism in Cancer Therapeutics
por: Yaku, Keisuke, et al.
Publicado: (2018)

Sobriety and Satiety: Is NAD+ the Answer?
por: Braidy, Nady, et al.
Publicado: (2020)

Enzymology of extracellular NAD metabolism
por: Gasparrini, Massimiliano, et al.
Publicado: (2021)

Sources and Importance of Mitochondrial NAD
por: Baur, Joseph, et al.
Publicado: (2020)

The Role of NAD+ in Regenerative Medicine
por: Conlon, Nichola J.
Publicado: (2021)

Impact of NAD+ metabolism on ovarian aging
por: Liang, Jinghui, et al.
Publicado: (2023)

A Novel NAD-RNA Decapping Pathway Discovered by Synthetic Light-Up NAD-RNAs
por: Abele, Florian, et al.
Publicado: (2020)

The Effect of Nicotinamide Riboside, an NAD + Precursor, on Glycolysis and NAD + Salvage Pathway in Alcohol-Stimulated Macrophages
por: Kang, Hyunju, et al.
Publicado: (2022)

NAD(+) metabolism-based immunoregulation and therapeutic potential
por: Fang, Jiankai, et al.
Publicado: (2023)

Metabolic flux analysis and the NAD(P)H/NAD(P)(+) ratios in chemostat cultures of Azotobacter vinelandii
por: García, Andres, et al.
Publicado: (2018)

The mitochondrial NAD (+) transporter (NDT1) plays important roles in cellular NAD (+) homeostasis in Arabidopsis thaliana
por: de Souza Chaves, Izabel, et al.
Publicado: (2019)

Streptococcus pyogenes NAD+-Glycohydrolase Reduces Skeletal Muscle βNAD+ Levels Independently of Streptolysin O
por: McIndoo, Eric R., et al.
Publicado: (2022)

Highly efficient 5' capping of mitochondrial RNA with NAD(+) and NADH by yeast and human mitochondrial RNA polymerase
por: Bird, Jeremy G, et al.
Publicado: (2018)

NADcapPro and circNC: methods for accurate profiling of NAD and non-canonical RNA caps in eukaryotes
por: Sharma, Sunny, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_7cemonmlfstiohvt5llbjitub2