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ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma

Background: ADPRH is a modulator of CD8+ T cell functions, and dysregulation of ADPRH has been identified to involve in carcinogenesis of cancers. However, the association of ADPRH with low grade glioma (LGG) remains unclear. Methods: The expression of ADPRH in LGG was first analyzed in GLIOVIS and...

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Autores principales: Zhang, Chunyu, Wang, Long, Liu, Haitao, Deng, Gang, Xu, Pengfei, Tan, Yinqiu, Xu, Yang, Liu, Baohui, Chen, Qianxue, Tian, Daofeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040889/
https://www.ncbi.nlm.nih.gov/pubmed/33854592
http://dx.doi.org/10.7150/jca.51643
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author Zhang, Chunyu
Wang, Long
Liu, Haitao
Deng, Gang
Xu, Pengfei
Tan, Yinqiu
Xu, Yang
Liu, Baohui
Chen, Qianxue
Tian, Daofeng
author_facet Zhang, Chunyu
Wang, Long
Liu, Haitao
Deng, Gang
Xu, Pengfei
Tan, Yinqiu
Xu, Yang
Liu, Baohui
Chen, Qianxue
Tian, Daofeng
author_sort Zhang, Chunyu
collection PubMed
description Background: ADPRH is a modulator of CD8+ T cell functions, and dysregulation of ADPRH has been identified to involve in carcinogenesis of cancers. However, the association of ADPRH with low grade glioma (LGG) remains unclear. Methods: The expression of ADPRH in LGG was first analyzed in GLIOVIS and GEPIA databases and then validated by real-time PCR (rt-PCR), immunochemistry and human protein atlas (HPA). Univariate and multivariate Cox analysis and Kaplan-Meier plots were designed to assess the prognostic value of ADPRH in LGG. The correlation of ADPRH and immune infiltration was evaluated by data in TIMER and ESTIMATE databases. Gene set enrichment analysis was conducted to detect biological processes associated with ADPRH. Results: ADPRH was significantly upregulated in LGG in comparison to non-tumor brain samples in transcriptomic and proteomic levels. The high ADPRH expression indicated unfavorable overall survival (OS) and progression-free survival (PFS) in patients with LGG using Kaplan-Meier plots. And multivariate Cox analysis demonstrated the expression level of ADPRH was an independent prognosis-predicting index for OS and PFS of LGG patients in all cohorts separately. Gene Set Enrichment Analysis (GSEA) indicated that high expression of ADPRH was involved in the upregulation of P53 signaling pathway, KRAS signaling pathway, IL6/JAK-STAT3 signaling and TNF-beta signaling pathways. By TIMER and ESTIMATE databases, we identified ADPRH expression had strong correlation with tumor immune infiltrating cells (TIICs). Conclusions: In summary, our findings demonstrated that ADPRH might be a potential prognostic biomarker and correlated with TIICs in LGG.
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spelling pubmed-80408892021-04-13 ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma Zhang, Chunyu Wang, Long Liu, Haitao Deng, Gang Xu, Pengfei Tan, Yinqiu Xu, Yang Liu, Baohui Chen, Qianxue Tian, Daofeng J Cancer Research Paper Background: ADPRH is a modulator of CD8+ T cell functions, and dysregulation of ADPRH has been identified to involve in carcinogenesis of cancers. However, the association of ADPRH with low grade glioma (LGG) remains unclear. Methods: The expression of ADPRH in LGG was first analyzed in GLIOVIS and GEPIA databases and then validated by real-time PCR (rt-PCR), immunochemistry and human protein atlas (HPA). Univariate and multivariate Cox analysis and Kaplan-Meier plots were designed to assess the prognostic value of ADPRH in LGG. The correlation of ADPRH and immune infiltration was evaluated by data in TIMER and ESTIMATE databases. Gene set enrichment analysis was conducted to detect biological processes associated with ADPRH. Results: ADPRH was significantly upregulated in LGG in comparison to non-tumor brain samples in transcriptomic and proteomic levels. The high ADPRH expression indicated unfavorable overall survival (OS) and progression-free survival (PFS) in patients with LGG using Kaplan-Meier plots. And multivariate Cox analysis demonstrated the expression level of ADPRH was an independent prognosis-predicting index for OS and PFS of LGG patients in all cohorts separately. Gene Set Enrichment Analysis (GSEA) indicated that high expression of ADPRH was involved in the upregulation of P53 signaling pathway, KRAS signaling pathway, IL6/JAK-STAT3 signaling and TNF-beta signaling pathways. By TIMER and ESTIMATE databases, we identified ADPRH expression had strong correlation with tumor immune infiltrating cells (TIICs). Conclusions: In summary, our findings demonstrated that ADPRH might be a potential prognostic biomarker and correlated with TIICs in LGG. Ivyspring International Publisher 2021-03-15 /pmc/articles/PMC8040889/ /pubmed/33854592 http://dx.doi.org/10.7150/jca.51643 Text en © The author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Zhang, Chunyu
Wang, Long
Liu, Haitao
Deng, Gang
Xu, Pengfei
Tan, Yinqiu
Xu, Yang
Liu, Baohui
Chen, Qianxue
Tian, Daofeng
ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma
title ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma
title_full ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma
title_fullStr ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma
title_full_unstemmed ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma
title_short ADPRH is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma
title_sort adprh is a prognosis-related biomarker and correlates with immune infiltrates in low grade glioma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8040889/
https://www.ncbi.nlm.nih.gov/pubmed/33854592
http://dx.doi.org/10.7150/jca.51643
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