Cargando…

A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood

To conquer the worldwide outbreak of COVID-19 virus, a large number of studies have been carried out on COVID-19 infection, transmission and treatment. However, few studies have been conducted from the perspectives of circRNA and lncRNA, which are known to be involved in regulating many life activit...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Yingping, Zhao, Tiejun, Deng, Riqiang, Xia, Xiaoping, Li, Bin, Wang, Xunzhang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8041881/
https://www.ncbi.nlm.nih.gov/pubmed/33846375
http://dx.doi.org/10.1038/s41598-021-86134-0
_version_ 1783678030163476480
author Wu, Yingping
Zhao, Tiejun
Deng, Riqiang
Xia, Xiaoping
Li, Bin
Wang, Xunzhang
author_facet Wu, Yingping
Zhao, Tiejun
Deng, Riqiang
Xia, Xiaoping
Li, Bin
Wang, Xunzhang
author_sort Wu, Yingping
collection PubMed
description To conquer the worldwide outbreak of COVID-19 virus, a large number of studies have been carried out on COVID-19 infection, transmission and treatment. However, few studies have been conducted from the perspectives of circRNA and lncRNA, which are known to be involved in regulating many life activities, such as immune tolerance and immune escapes, and hence may provide invaluable information in the emerging COVID-19 infection and recurrence. Moreover, exosomes has been reported to play an important role in COVID-19 recurrence, and thus may interact with the expression of circRNA and lncRNA. In this work, we sequenced circRNA, lncRNA and mRNA from recurrent COVID-19 patients and healthy people, and compared the differences. GO and KEGG enrichment analysis show that differentially expressed circRNA and lncRNA are mainly involved in the regulation of host cell cycle, apoptosis, immune inflammation, signaling pathway and other processes. The comparison to exosomes related databases shows that there are 114 differentially expressed circRNA, and 10 differentially expressed lncRNA related to exosomes. These studies provide reference for exploring circRNA and lncRNA to study the infection mechanism of COVID-19, their diagnostic and therapeutic values, as well as the possibility to employ them as biomarkers.
format Online
Article
Text
id pubmed-8041881
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-80418812021-04-13 A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood Wu, Yingping Zhao, Tiejun Deng, Riqiang Xia, Xiaoping Li, Bin Wang, Xunzhang Sci Rep Article To conquer the worldwide outbreak of COVID-19 virus, a large number of studies have been carried out on COVID-19 infection, transmission and treatment. However, few studies have been conducted from the perspectives of circRNA and lncRNA, which are known to be involved in regulating many life activities, such as immune tolerance and immune escapes, and hence may provide invaluable information in the emerging COVID-19 infection and recurrence. Moreover, exosomes has been reported to play an important role in COVID-19 recurrence, and thus may interact with the expression of circRNA and lncRNA. In this work, we sequenced circRNA, lncRNA and mRNA from recurrent COVID-19 patients and healthy people, and compared the differences. GO and KEGG enrichment analysis show that differentially expressed circRNA and lncRNA are mainly involved in the regulation of host cell cycle, apoptosis, immune inflammation, signaling pathway and other processes. The comparison to exosomes related databases shows that there are 114 differentially expressed circRNA, and 10 differentially expressed lncRNA related to exosomes. These studies provide reference for exploring circRNA and lncRNA to study the infection mechanism of COVID-19, their diagnostic and therapeutic values, as well as the possibility to employ them as biomarkers. Nature Publishing Group UK 2021-04-12 /pmc/articles/PMC8041881/ /pubmed/33846375 http://dx.doi.org/10.1038/s41598-021-86134-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Wu, Yingping
Zhao, Tiejun
Deng, Riqiang
Xia, Xiaoping
Li, Bin
Wang, Xunzhang
A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood
title A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood
title_full A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood
title_fullStr A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood
title_full_unstemmed A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood
title_short A study of differential circRNA and lncRNA expressions in COVID-19-infected peripheral blood
title_sort study of differential circrna and lncrna expressions in covid-19-infected peripheral blood
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8041881/
https://www.ncbi.nlm.nih.gov/pubmed/33846375
http://dx.doi.org/10.1038/s41598-021-86134-0
work_keys_str_mv AT wuyingping astudyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT zhaotiejun astudyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT dengriqiang astudyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT xiaxiaoping astudyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT libin astudyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT wangxunzhang astudyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT wuyingping studyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT zhaotiejun studyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT dengriqiang studyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT xiaxiaoping studyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT libin studyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood
AT wangxunzhang studyofdifferentialcircrnaandlncrnaexpressionsincovid19infectedperipheralblood