Cargando…

Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins

Microcystins (MCs) are extremely hazardous to the ecological environment and public health. How to control and remove MCs is an unsolved problem all over the world. Some microbes and their enzymes are thought to be effective in degrading MCs. Microcystinase can linearize microcystin-leucine-arginine...

Descripción completa

Detalles Bibliográficos
Autores principales: Wei, Jia, Huang, Feiyu, Feng, Hai, Massey, Isaac Yaw, Clara, Tezi, Long, Dingxin, Cao, Yi, Luo, Jiayou, Yang, Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8042282/
https://www.ncbi.nlm.nih.gov/pubmed/33859631
http://dx.doi.org/10.3389/fmicb.2021.646084
_version_ 1783678093262585856
author Wei, Jia
Huang, Feiyu
Feng, Hai
Massey, Isaac Yaw
Clara, Tezi
Long, Dingxin
Cao, Yi
Luo, Jiayou
Yang, Fei
author_facet Wei, Jia
Huang, Feiyu
Feng, Hai
Massey, Isaac Yaw
Clara, Tezi
Long, Dingxin
Cao, Yi
Luo, Jiayou
Yang, Fei
author_sort Wei, Jia
collection PubMed
description Microcystins (MCs) are extremely hazardous to the ecological environment and public health. How to control and remove MCs is an unsolved problem all over the world. Some microbes and their enzymes are thought to be effective in degrading MCs. Microcystinase can linearize microcystin-leucine-arginine (MC-LR) via a specific locus. However, linearized MC-LR is also very toxic and needs to be removed. How linearized MC-LR was metabolized by linearized-microcystinase, especially how linearized-microcystinase binds to linearized MC-LR, has not been defined. A combination of in vitro experiments and computer simulation was applied to explore the characterization and molecular mechanisms for linearized MC-LR degraded by linearized-microcystinase. The purified linearized-microcystinase was obtained by recombinant Escherichia coli overexpressing. The concentration of linearized MC-LR was detected by high-performance liquid chromatography, and linearized MC-LR degradation products were analyzed by the mass spectrometer. Homology modeling was used to predict the structure of the linearized-microcystinase. Molecular docking techniques on the computer were used to simulate the binding sites of linearized-microcystinase and linearized MC-LR. The purified linearized-microcystinase was obtained successfully. The linearized-microcystinase degraded linearized MC-LR to tetrapeptide efficiently. The second structure of linearized-microcystinase consisted of many alpha-helices, beta-strands, and colis. Linearized-microcystinase interacted the linearized MC-LR with hydrogen bond, hydrophobic interaction, electrostatic forces, and the Van der Waals force. This study firstly reveals the characterization and specific enzymatic mechanism of linearized-microcystinase for catalyzing linearized MC-LR. These findings encourage the application of MC-degrading engineering bacteria and build a great technique for MC-LR biodegradation in environmental engineering.
format Online
Article
Text
id pubmed-8042282
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-80422822021-04-14 Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins Wei, Jia Huang, Feiyu Feng, Hai Massey, Isaac Yaw Clara, Tezi Long, Dingxin Cao, Yi Luo, Jiayou Yang, Fei Front Microbiol Microbiology Microcystins (MCs) are extremely hazardous to the ecological environment and public health. How to control and remove MCs is an unsolved problem all over the world. Some microbes and their enzymes are thought to be effective in degrading MCs. Microcystinase can linearize microcystin-leucine-arginine (MC-LR) via a specific locus. However, linearized MC-LR is also very toxic and needs to be removed. How linearized MC-LR was metabolized by linearized-microcystinase, especially how linearized-microcystinase binds to linearized MC-LR, has not been defined. A combination of in vitro experiments and computer simulation was applied to explore the characterization and molecular mechanisms for linearized MC-LR degraded by linearized-microcystinase. The purified linearized-microcystinase was obtained by recombinant Escherichia coli overexpressing. The concentration of linearized MC-LR was detected by high-performance liquid chromatography, and linearized MC-LR degradation products were analyzed by the mass spectrometer. Homology modeling was used to predict the structure of the linearized-microcystinase. Molecular docking techniques on the computer were used to simulate the binding sites of linearized-microcystinase and linearized MC-LR. The purified linearized-microcystinase was obtained successfully. The linearized-microcystinase degraded linearized MC-LR to tetrapeptide efficiently. The second structure of linearized-microcystinase consisted of many alpha-helices, beta-strands, and colis. Linearized-microcystinase interacted the linearized MC-LR with hydrogen bond, hydrophobic interaction, electrostatic forces, and the Van der Waals force. This study firstly reveals the characterization and specific enzymatic mechanism of linearized-microcystinase for catalyzing linearized MC-LR. These findings encourage the application of MC-degrading engineering bacteria and build a great technique for MC-LR biodegradation in environmental engineering. Frontiers Media S.A. 2021-03-30 /pmc/articles/PMC8042282/ /pubmed/33859631 http://dx.doi.org/10.3389/fmicb.2021.646084 Text en Copyright © 2021 Wei, Huang, Feng, Massey, Clara, Long, Cao, Luo and Yang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Wei, Jia
Huang, Feiyu
Feng, Hai
Massey, Isaac Yaw
Clara, Tezi
Long, Dingxin
Cao, Yi
Luo, Jiayou
Yang, Fei
Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins
title Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins
title_full Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins
title_fullStr Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins
title_full_unstemmed Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins
title_short Characterization and Mechanism of Linearized-Microcystinase Involved in Bacterial Degradation of Microcystins
title_sort characterization and mechanism of linearized-microcystinase involved in bacterial degradation of microcystins
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8042282/
https://www.ncbi.nlm.nih.gov/pubmed/33859631
http://dx.doi.org/10.3389/fmicb.2021.646084
work_keys_str_mv AT weijia characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT huangfeiyu characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT fenghai characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT masseyisaacyaw characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT claratezi characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT longdingxin characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT caoyi characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT luojiayou characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins
AT yangfei characterizationandmechanismoflinearizedmicrocystinaseinvolvedinbacterialdegradationofmicrocystins