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Forecasting of the COVID-19 pandemic situation of Korea

For the novel coronavirus disease 2019 (COVID-19), predictive modeling, in the literature, uses broadly susceptible exposed infected recoverd (SEIR)/susceptible infected recoverd (SIR), agent-based, curve-fitting models. Governments and legislative bodies rely on insights from prediction models to s...

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Autores principales: Goo, Taewan, Apio, Catherine, Heo, Gyujin, Lee, Doeun, Lee, Jong Hyeok, Lim, Jisun, Han, Kyulhee, Park, Taesung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8042305/
https://www.ncbi.nlm.nih.gov/pubmed/33840175
http://dx.doi.org/10.5808/gi.21028
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author Goo, Taewan
Apio, Catherine
Heo, Gyujin
Lee, Doeun
Lee, Jong Hyeok
Lim, Jisun
Han, Kyulhee
Park, Taesung
author_facet Goo, Taewan
Apio, Catherine
Heo, Gyujin
Lee, Doeun
Lee, Jong Hyeok
Lim, Jisun
Han, Kyulhee
Park, Taesung
author_sort Goo, Taewan
collection PubMed
description For the novel coronavirus disease 2019 (COVID-19), predictive modeling, in the literature, uses broadly susceptible exposed infected recoverd (SEIR)/susceptible infected recoverd (SIR), agent-based, curve-fitting models. Governments and legislative bodies rely on insights from prediction models to suggest new policies and to assess the effectiveness of enforced policies. Therefore, access to accurate outbreak prediction models is essential to obtain insights into the likely spread and consequences of infectious diseases. The objective of this study is to predict the future COVID-19 situation of Korea. Here, we employed 5 models for this analysis; SEIR, local linear regression (LLR), negative binomial (NB) regression, segment Poisson, deep-learning based long short-term memory models (LSTM) and tree based gradient boosting machine (GBM). After prediction, model performance comparison was evelauated using relative mean squared errors (RMSE) for two sets of train (January 20, 2020‒December 31, 2020 and January 20, 2020‒January 31, 2021) and testing data (January 1, 2021‒February 28, 2021 and February 1, 2021‒February 28, 2021) . Except for segmented Poisson model, the other models predicted a decline in the daily confirmed cases in the country for the coming future. RMSE values’ comparison showed that LLR, GBM, SEIR, NB, and LSTM respectively, performed well in the forecasting of the pandemic situation of the country. A good understanding of the epidemic dynamics would greatly enhance the control and prevention of COVID-19 and other infectious diseases. Therefore, with increasing daily confirmed cases since this year, these results could help in the pandemic response by informing decisions about planning, resource allocation, and decision concerning social distancing policies.
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spelling pubmed-80423052021-04-19 Forecasting of the COVID-19 pandemic situation of Korea Goo, Taewan Apio, Catherine Heo, Gyujin Lee, Doeun Lee, Jong Hyeok Lim, Jisun Han, Kyulhee Park, Taesung Genomics Inform Original Article For the novel coronavirus disease 2019 (COVID-19), predictive modeling, in the literature, uses broadly susceptible exposed infected recoverd (SEIR)/susceptible infected recoverd (SIR), agent-based, curve-fitting models. Governments and legislative bodies rely on insights from prediction models to suggest new policies and to assess the effectiveness of enforced policies. Therefore, access to accurate outbreak prediction models is essential to obtain insights into the likely spread and consequences of infectious diseases. The objective of this study is to predict the future COVID-19 situation of Korea. Here, we employed 5 models for this analysis; SEIR, local linear regression (LLR), negative binomial (NB) regression, segment Poisson, deep-learning based long short-term memory models (LSTM) and tree based gradient boosting machine (GBM). After prediction, model performance comparison was evelauated using relative mean squared errors (RMSE) for two sets of train (January 20, 2020‒December 31, 2020 and January 20, 2020‒January 31, 2021) and testing data (January 1, 2021‒February 28, 2021 and February 1, 2021‒February 28, 2021) . Except for segmented Poisson model, the other models predicted a decline in the daily confirmed cases in the country for the coming future. RMSE values’ comparison showed that LLR, GBM, SEIR, NB, and LSTM respectively, performed well in the forecasting of the pandemic situation of the country. A good understanding of the epidemic dynamics would greatly enhance the control and prevention of COVID-19 and other infectious diseases. Therefore, with increasing daily confirmed cases since this year, these results could help in the pandemic response by informing decisions about planning, resource allocation, and decision concerning social distancing policies. Korea Genome Organization 2021-03-25 /pmc/articles/PMC8042305/ /pubmed/33840175 http://dx.doi.org/10.5808/gi.21028 Text en (c) 2021, Korea Genome Organization https://creativecommons.org/licenses/by/4.0/(CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Goo, Taewan
Apio, Catherine
Heo, Gyujin
Lee, Doeun
Lee, Jong Hyeok
Lim, Jisun
Han, Kyulhee
Park, Taesung
Forecasting of the COVID-19 pandemic situation of Korea
title Forecasting of the COVID-19 pandemic situation of Korea
title_full Forecasting of the COVID-19 pandemic situation of Korea
title_fullStr Forecasting of the COVID-19 pandemic situation of Korea
title_full_unstemmed Forecasting of the COVID-19 pandemic situation of Korea
title_short Forecasting of the COVID-19 pandemic situation of Korea
title_sort forecasting of the covid-19 pandemic situation of korea
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8042305/
https://www.ncbi.nlm.nih.gov/pubmed/33840175
http://dx.doi.org/10.5808/gi.21028
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