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Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)
Polyopes lancifolius is a species of Halymeniales, the fifth species-rich order within Rhodophyta. Using next-generation sequencing techniques, we recovered the complete mitochondrial genome of P. lancifolius, i.e. total 26,142 bp in length with 31% GC contents. A total of 49 functional genes were a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8043551/ https://www.ncbi.nlm.nih.gov/pubmed/33889751 http://dx.doi.org/10.1080/23802359.2021.1908866 |
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author | Kim, Su Yeon Cho, Chung Hyun Yang, Eun Chan Yoon, Hwan Su Kim, Myung Sook |
author_facet | Kim, Su Yeon Cho, Chung Hyun Yang, Eun Chan Yoon, Hwan Su Kim, Myung Sook |
author_sort | Kim, Su Yeon |
collection | PubMed |
description | Polyopes lancifolius is a species of Halymeniales, the fifth species-rich order within Rhodophyta. Using next-generation sequencing techniques, we recovered the complete mitochondrial genome of P. lancifolius, i.e. total 26,142 bp in length with 31% GC contents. A total of 49 functional genes were annotated, including 24 protein-coding, 23 transfer RNA, and 2 ribosomal RNA genes. The gene content and synteny have been highly congruent to those of the other halymenialean species, such as Grateloupia taiwanensis, G. filicina, and Grateloupia angusta. Interestingly, the cox1 intron and intronic Open Reading Frame (ORF) are absent in P. lancifolius, that are existed in the other three halymenialean species. |
format | Online Article Text |
id | pubmed-8043551 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-80435512021-04-21 Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) Kim, Su Yeon Cho, Chung Hyun Yang, Eun Chan Yoon, Hwan Su Kim, Myung Sook Mitochondrial DNA B Resour Mitogenome Announcement Polyopes lancifolius is a species of Halymeniales, the fifth species-rich order within Rhodophyta. Using next-generation sequencing techniques, we recovered the complete mitochondrial genome of P. lancifolius, i.e. total 26,142 bp in length with 31% GC contents. A total of 49 functional genes were annotated, including 24 protein-coding, 23 transfer RNA, and 2 ribosomal RNA genes. The gene content and synteny have been highly congruent to those of the other halymenialean species, such as Grateloupia taiwanensis, G. filicina, and Grateloupia angusta. Interestingly, the cox1 intron and intronic Open Reading Frame (ORF) are absent in P. lancifolius, that are existed in the other three halymenialean species. Taylor & Francis 2021-04-08 /pmc/articles/PMC8043551/ /pubmed/33889751 http://dx.doi.org/10.1080/23802359.2021.1908866 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Kim, Su Yeon Cho, Chung Hyun Yang, Eun Chan Yoon, Hwan Su Kim, Myung Sook Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) |
title | Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) |
title_full | Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) |
title_fullStr | Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) |
title_full_unstemmed | Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) |
title_short | Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) |
title_sort | complete mitochondrial genome of polyopes lancifolius and comparison with related species in halymeniales (rhodophyta) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8043551/ https://www.ncbi.nlm.nih.gov/pubmed/33889751 http://dx.doi.org/10.1080/23802359.2021.1908866 |
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