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Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)

Polyopes lancifolius is a species of Halymeniales, the fifth species-rich order within Rhodophyta. Using next-generation sequencing techniques, we recovered the complete mitochondrial genome of P. lancifolius, i.e. total 26,142 bp in length with 31% GC contents. A total of 49 functional genes were a...

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Autores principales: Kim, Su Yeon, Cho, Chung Hyun, Yang, Eun Chan, Yoon, Hwan Su, Kim, Myung Sook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8043551/
https://www.ncbi.nlm.nih.gov/pubmed/33889751
http://dx.doi.org/10.1080/23802359.2021.1908866
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author Kim, Su Yeon
Cho, Chung Hyun
Yang, Eun Chan
Yoon, Hwan Su
Kim, Myung Sook
author_facet Kim, Su Yeon
Cho, Chung Hyun
Yang, Eun Chan
Yoon, Hwan Su
Kim, Myung Sook
author_sort Kim, Su Yeon
collection PubMed
description Polyopes lancifolius is a species of Halymeniales, the fifth species-rich order within Rhodophyta. Using next-generation sequencing techniques, we recovered the complete mitochondrial genome of P. lancifolius, i.e. total 26,142 bp in length with 31% GC contents. A total of 49 functional genes were annotated, including 24 protein-coding, 23 transfer RNA, and 2 ribosomal RNA genes. The gene content and synteny have been highly congruent to those of the other halymenialean species, such as Grateloupia taiwanensis, G. filicina, and Grateloupia angusta. Interestingly, the cox1 intron and intronic Open Reading Frame (ORF) are absent in P. lancifolius, that are existed in the other three halymenialean species.
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spelling pubmed-80435512021-04-21 Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta) Kim, Su Yeon Cho, Chung Hyun Yang, Eun Chan Yoon, Hwan Su Kim, Myung Sook Mitochondrial DNA B Resour Mitogenome Announcement Polyopes lancifolius is a species of Halymeniales, the fifth species-rich order within Rhodophyta. Using next-generation sequencing techniques, we recovered the complete mitochondrial genome of P. lancifolius, i.e. total 26,142 bp in length with 31% GC contents. A total of 49 functional genes were annotated, including 24 protein-coding, 23 transfer RNA, and 2 ribosomal RNA genes. The gene content and synteny have been highly congruent to those of the other halymenialean species, such as Grateloupia taiwanensis, G. filicina, and Grateloupia angusta. Interestingly, the cox1 intron and intronic Open Reading Frame (ORF) are absent in P. lancifolius, that are existed in the other three halymenialean species. Taylor & Francis 2021-04-08 /pmc/articles/PMC8043551/ /pubmed/33889751 http://dx.doi.org/10.1080/23802359.2021.1908866 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Kim, Su Yeon
Cho, Chung Hyun
Yang, Eun Chan
Yoon, Hwan Su
Kim, Myung Sook
Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)
title Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)
title_full Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)
title_fullStr Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)
title_full_unstemmed Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)
title_short Complete mitochondrial genome of Polyopes lancifolius and comparison with related species in Halymeniales (Rhodophyta)
title_sort complete mitochondrial genome of polyopes lancifolius and comparison with related species in halymeniales (rhodophyta)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8043551/
https://www.ncbi.nlm.nih.gov/pubmed/33889751
http://dx.doi.org/10.1080/23802359.2021.1908866
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