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The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration

Cyperus iria L. is an annual weed of the family Cyperaceae, which plays an important role in the environmental remediation of uranium contaminate. Here, the complete chloroplast (cp) genome of Cyperus iria has been reconstructed from the complete genome Illumina sequencing data. The complete cp geno...

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Autores principales: Yang, Ling-ling, Niu, Jun-qi, Tang, Wen-wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8043553/
https://www.ncbi.nlm.nih.gov/pubmed/33889743
http://dx.doi.org/10.1080/23802359.2021.1908865
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author Yang, Ling-ling
Niu, Jun-qi
Tang, Wen-wei
author_facet Yang, Ling-ling
Niu, Jun-qi
Tang, Wen-wei
author_sort Yang, Ling-ling
collection PubMed
description Cyperus iria L. is an annual weed of the family Cyperaceae, which plays an important role in the environmental remediation of uranium contaminate. Here, the complete chloroplast (cp) genome of Cyperus iria has been reconstructed from the complete genome Illumina sequencing data. The complete cp genome was 185,697 bp in length, containing a large single copy region (LSC) of 99,360 bp and a small single copy region (SSC) of 10,267 bp, which were separated by a pair of 38,035 bp inverted repeat regions (IRs). The cp genome contained 135 genes, including 89 protein-coding genes (PCGs), eight rRNA genes, and 38 tRNA genes. The cp genome has a GC content of 33.16%. Further, the phylogenetic analysis showed a strong sister relationship with Cyperus rotundus.
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spelling pubmed-80435532021-04-21 The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration Yang, Ling-ling Niu, Jun-qi Tang, Wen-wei Mitochondrial DNA B Resour Mitogenome Announcement Cyperus iria L. is an annual weed of the family Cyperaceae, which plays an important role in the environmental remediation of uranium contaminate. Here, the complete chloroplast (cp) genome of Cyperus iria has been reconstructed from the complete genome Illumina sequencing data. The complete cp genome was 185,697 bp in length, containing a large single copy region (LSC) of 99,360 bp and a small single copy region (SSC) of 10,267 bp, which were separated by a pair of 38,035 bp inverted repeat regions (IRs). The cp genome contained 135 genes, including 89 protein-coding genes (PCGs), eight rRNA genes, and 38 tRNA genes. The cp genome has a GC content of 33.16%. Further, the phylogenetic analysis showed a strong sister relationship with Cyperus rotundus. Taylor & Francis 2021-04-08 /pmc/articles/PMC8043553/ /pubmed/33889743 http://dx.doi.org/10.1080/23802359.2021.1908865 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yang, Ling-ling
Niu, Jun-qi
Tang, Wen-wei
The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration
title The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration
title_full The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration
title_fullStr The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration
title_full_unstemmed The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration
title_short The complete chloroplast genome of pioneering plant Cyperus iria L. (Cyperaceae) in ecological restoration
title_sort complete chloroplast genome of pioneering plant cyperus iria l. (cyperaceae) in ecological restoration
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8043553/
https://www.ncbi.nlm.nih.gov/pubmed/33889743
http://dx.doi.org/10.1080/23802359.2021.1908865
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