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Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development

BACKGROUND: Accurate prediction of the disease severity of patients with COVID-19 would greatly improve care delivery and resource allocation and thereby reduce mortality risks, especially in less developed countries. Many patient-related factors, such as pre-existing comorbidities, affect disease s...

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Autores principales: Aktar, Sakifa, Ahamad, Md Martuza, Rashed-Al-Mahfuz, Md, Azad, AKM, Uddin, Shahadat, Kamal, AHM, Alyami, Salem A, Lin, Ping-I, Islam, Sheikh Mohammed Shariful, Quinn, Julian MW, Eapen, Valsamma, Moni, Mohammad Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8045777/
https://www.ncbi.nlm.nih.gov/pubmed/33779565
http://dx.doi.org/10.2196/25884
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author Aktar, Sakifa
Ahamad, Md Martuza
Rashed-Al-Mahfuz, Md
Azad, AKM
Uddin, Shahadat
Kamal, AHM
Alyami, Salem A
Lin, Ping-I
Islam, Sheikh Mohammed Shariful
Quinn, Julian MW
Eapen, Valsamma
Moni, Mohammad Ali
author_facet Aktar, Sakifa
Ahamad, Md Martuza
Rashed-Al-Mahfuz, Md
Azad, AKM
Uddin, Shahadat
Kamal, AHM
Alyami, Salem A
Lin, Ping-I
Islam, Sheikh Mohammed Shariful
Quinn, Julian MW
Eapen, Valsamma
Moni, Mohammad Ali
author_sort Aktar, Sakifa
collection PubMed
description BACKGROUND: Accurate prediction of the disease severity of patients with COVID-19 would greatly improve care delivery and resource allocation and thereby reduce mortality risks, especially in less developed countries. Many patient-related factors, such as pre-existing comorbidities, affect disease severity and can be used to aid this prediction. OBJECTIVE: Because rapid automated profiling of peripheral blood samples is widely available, we aimed to investigate how data from the peripheral blood of patients with COVID-19 can be used to predict clinical outcomes. METHODS: We investigated clinical data sets of patients with COVID-19 with known outcomes by combining statistical comparison and correlation methods with machine learning algorithms; the latter included decision tree, random forest, variants of gradient boosting machine, support vector machine, k-nearest neighbor, and deep learning methods. RESULTS: Our work revealed that several clinical parameters that are measurable in blood samples are factors that can discriminate between healthy people and COVID-19–positive patients, and we showed the value of these parameters in predicting later severity of COVID-19 symptoms. We developed a number of analytical methods that showed accuracy and precision scores >90% for disease severity prediction. CONCLUSIONS: We developed methodologies to analyze routine patient clinical data that enable more accurate prediction of COVID-19 patient outcomes. With this approach, data from standard hospital laboratory analyses of patient blood could be used to identify patients with COVID-19 who are at high risk of mortality, thus enabling optimization of hospital facilities for COVID-19 treatment.
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spelling pubmed-80457772021-04-22 Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development Aktar, Sakifa Ahamad, Md Martuza Rashed-Al-Mahfuz, Md Azad, AKM Uddin, Shahadat Kamal, AHM Alyami, Salem A Lin, Ping-I Islam, Sheikh Mohammed Shariful Quinn, Julian MW Eapen, Valsamma Moni, Mohammad Ali JMIR Med Inform Original Paper BACKGROUND: Accurate prediction of the disease severity of patients with COVID-19 would greatly improve care delivery and resource allocation and thereby reduce mortality risks, especially in less developed countries. Many patient-related factors, such as pre-existing comorbidities, affect disease severity and can be used to aid this prediction. OBJECTIVE: Because rapid automated profiling of peripheral blood samples is widely available, we aimed to investigate how data from the peripheral blood of patients with COVID-19 can be used to predict clinical outcomes. METHODS: We investigated clinical data sets of patients with COVID-19 with known outcomes by combining statistical comparison and correlation methods with machine learning algorithms; the latter included decision tree, random forest, variants of gradient boosting machine, support vector machine, k-nearest neighbor, and deep learning methods. RESULTS: Our work revealed that several clinical parameters that are measurable in blood samples are factors that can discriminate between healthy people and COVID-19–positive patients, and we showed the value of these parameters in predicting later severity of COVID-19 symptoms. We developed a number of analytical methods that showed accuracy and precision scores >90% for disease severity prediction. CONCLUSIONS: We developed methodologies to analyze routine patient clinical data that enable more accurate prediction of COVID-19 patient outcomes. With this approach, data from standard hospital laboratory analyses of patient blood could be used to identify patients with COVID-19 who are at high risk of mortality, thus enabling optimization of hospital facilities for COVID-19 treatment. JMIR Publications 2021-04-13 /pmc/articles/PMC8045777/ /pubmed/33779565 http://dx.doi.org/10.2196/25884 Text en ©Sakifa Aktar, Md Martuza Ahamad, Md Rashed-Al-Mahfuz, AKM Azad, Shahadat Uddin, AHM Kamal, Salem A Alyami, Ping-I Lin, Sheikh Mohammed Shariful Islam, Julian MW Quinn, Valsamma Eapen, Mohammad Ali Moni. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 13.04.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Aktar, Sakifa
Ahamad, Md Martuza
Rashed-Al-Mahfuz, Md
Azad, AKM
Uddin, Shahadat
Kamal, AHM
Alyami, Salem A
Lin, Ping-I
Islam, Sheikh Mohammed Shariful
Quinn, Julian MW
Eapen, Valsamma
Moni, Mohammad Ali
Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development
title Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development
title_full Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development
title_fullStr Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development
title_full_unstemmed Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development
title_short Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development
title_sort machine learning approach to predicting covid-19 disease severity based on clinical blood test data: statistical analysis and model development
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8045777/
https://www.ncbi.nlm.nih.gov/pubmed/33779565
http://dx.doi.org/10.2196/25884
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