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Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development
BACKGROUND: Accurate prediction of the disease severity of patients with COVID-19 would greatly improve care delivery and resource allocation and thereby reduce mortality risks, especially in less developed countries. Many patient-related factors, such as pre-existing comorbidities, affect disease s...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8045777/ https://www.ncbi.nlm.nih.gov/pubmed/33779565 http://dx.doi.org/10.2196/25884 |
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author | Aktar, Sakifa Ahamad, Md Martuza Rashed-Al-Mahfuz, Md Azad, AKM Uddin, Shahadat Kamal, AHM Alyami, Salem A Lin, Ping-I Islam, Sheikh Mohammed Shariful Quinn, Julian MW Eapen, Valsamma Moni, Mohammad Ali |
author_facet | Aktar, Sakifa Ahamad, Md Martuza Rashed-Al-Mahfuz, Md Azad, AKM Uddin, Shahadat Kamal, AHM Alyami, Salem A Lin, Ping-I Islam, Sheikh Mohammed Shariful Quinn, Julian MW Eapen, Valsamma Moni, Mohammad Ali |
author_sort | Aktar, Sakifa |
collection | PubMed |
description | BACKGROUND: Accurate prediction of the disease severity of patients with COVID-19 would greatly improve care delivery and resource allocation and thereby reduce mortality risks, especially in less developed countries. Many patient-related factors, such as pre-existing comorbidities, affect disease severity and can be used to aid this prediction. OBJECTIVE: Because rapid automated profiling of peripheral blood samples is widely available, we aimed to investigate how data from the peripheral blood of patients with COVID-19 can be used to predict clinical outcomes. METHODS: We investigated clinical data sets of patients with COVID-19 with known outcomes by combining statistical comparison and correlation methods with machine learning algorithms; the latter included decision tree, random forest, variants of gradient boosting machine, support vector machine, k-nearest neighbor, and deep learning methods. RESULTS: Our work revealed that several clinical parameters that are measurable in blood samples are factors that can discriminate between healthy people and COVID-19–positive patients, and we showed the value of these parameters in predicting later severity of COVID-19 symptoms. We developed a number of analytical methods that showed accuracy and precision scores >90% for disease severity prediction. CONCLUSIONS: We developed methodologies to analyze routine patient clinical data that enable more accurate prediction of COVID-19 patient outcomes. With this approach, data from standard hospital laboratory analyses of patient blood could be used to identify patients with COVID-19 who are at high risk of mortality, thus enabling optimization of hospital facilities for COVID-19 treatment. |
format | Online Article Text |
id | pubmed-8045777 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-80457772021-04-22 Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development Aktar, Sakifa Ahamad, Md Martuza Rashed-Al-Mahfuz, Md Azad, AKM Uddin, Shahadat Kamal, AHM Alyami, Salem A Lin, Ping-I Islam, Sheikh Mohammed Shariful Quinn, Julian MW Eapen, Valsamma Moni, Mohammad Ali JMIR Med Inform Original Paper BACKGROUND: Accurate prediction of the disease severity of patients with COVID-19 would greatly improve care delivery and resource allocation and thereby reduce mortality risks, especially in less developed countries. Many patient-related factors, such as pre-existing comorbidities, affect disease severity and can be used to aid this prediction. OBJECTIVE: Because rapid automated profiling of peripheral blood samples is widely available, we aimed to investigate how data from the peripheral blood of patients with COVID-19 can be used to predict clinical outcomes. METHODS: We investigated clinical data sets of patients with COVID-19 with known outcomes by combining statistical comparison and correlation methods with machine learning algorithms; the latter included decision tree, random forest, variants of gradient boosting machine, support vector machine, k-nearest neighbor, and deep learning methods. RESULTS: Our work revealed that several clinical parameters that are measurable in blood samples are factors that can discriminate between healthy people and COVID-19–positive patients, and we showed the value of these parameters in predicting later severity of COVID-19 symptoms. We developed a number of analytical methods that showed accuracy and precision scores >90% for disease severity prediction. CONCLUSIONS: We developed methodologies to analyze routine patient clinical data that enable more accurate prediction of COVID-19 patient outcomes. With this approach, data from standard hospital laboratory analyses of patient blood could be used to identify patients with COVID-19 who are at high risk of mortality, thus enabling optimization of hospital facilities for COVID-19 treatment. JMIR Publications 2021-04-13 /pmc/articles/PMC8045777/ /pubmed/33779565 http://dx.doi.org/10.2196/25884 Text en ©Sakifa Aktar, Md Martuza Ahamad, Md Rashed-Al-Mahfuz, AKM Azad, Shahadat Uddin, AHM Kamal, Salem A Alyami, Ping-I Lin, Sheikh Mohammed Shariful Islam, Julian MW Quinn, Valsamma Eapen, Mohammad Ali Moni. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 13.04.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Aktar, Sakifa Ahamad, Md Martuza Rashed-Al-Mahfuz, Md Azad, AKM Uddin, Shahadat Kamal, AHM Alyami, Salem A Lin, Ping-I Islam, Sheikh Mohammed Shariful Quinn, Julian MW Eapen, Valsamma Moni, Mohammad Ali Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development |
title | Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development |
title_full | Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development |
title_fullStr | Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development |
title_full_unstemmed | Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development |
title_short | Machine Learning Approach to Predicting COVID-19 Disease Severity Based on Clinical Blood Test Data: Statistical Analysis and Model Development |
title_sort | machine learning approach to predicting covid-19 disease severity based on clinical blood test data: statistical analysis and model development |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8045777/ https://www.ncbi.nlm.nih.gov/pubmed/33779565 http://dx.doi.org/10.2196/25884 |
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