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Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults
Resting‐state functional connectivity in the human brain is heritable, and previous studies have investigated the genetic basis underlying functional connectivity. However, at present, the molecular mechanisms associated with functional network centrality are still largely unknown. In this study, fu...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8046072/ https://www.ncbi.nlm.nih.gov/pubmed/33570215 http://dx.doi.org/10.1002/hbm.25362 |
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author | Zhu, Dan Yuan, Tengfei Gao, Junfeng Xu, Qiang Xue, Kaizhong Zhu, Wenshuang Tang, Jie Liu, Feng Wang, Junping Yu, Chunshui |
author_facet | Zhu, Dan Yuan, Tengfei Gao, Junfeng Xu, Qiang Xue, Kaizhong Zhu, Wenshuang Tang, Jie Liu, Feng Wang, Junping Yu, Chunshui |
author_sort | Zhu, Dan |
collection | PubMed |
description | Resting‐state functional connectivity in the human brain is heritable, and previous studies have investigated the genetic basis underlying functional connectivity. However, at present, the molecular mechanisms associated with functional network centrality are still largely unknown. In this study, functional networks were constructed, and the graph‐theory method was employed to calculate network centrality in 100 healthy young adults from the Human Connectome Project. Specifically, functional connectivity strength (FCS), also known as the “degree centrality” of weighted networks, is calculated to measure functional network centrality. A multivariate technique of partial least squares regression (PLSR) was then conducted to identify genes whose spatial expression profiles best predicted the FCS distribution. We found that FCS spatial distribution was significantly positively correlated with the expression of genes defined by the first PLSR component. The FCS‐related genes we identified were significantly enriched for ion channels, axon guidance, and synaptic transmission. Moreover, FCS‐related genes were preferentially expressed in cortical neurons and young adulthood and were enriched in numerous neurodegenerative and neuropsychiatric disorders. Furthermore, a series of validation and robustness analyses demonstrated the reliability of the results. Overall, our results suggest that the spatial distribution of FCS is modulated by the expression of a set of genes associated with ion channels, axon guidance, and synaptic transmission. |
format | Online Article Text |
id | pubmed-8046072 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80460722021-04-16 Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults Zhu, Dan Yuan, Tengfei Gao, Junfeng Xu, Qiang Xue, Kaizhong Zhu, Wenshuang Tang, Jie Liu, Feng Wang, Junping Yu, Chunshui Hum Brain Mapp Research Articles Resting‐state functional connectivity in the human brain is heritable, and previous studies have investigated the genetic basis underlying functional connectivity. However, at present, the molecular mechanisms associated with functional network centrality are still largely unknown. In this study, functional networks were constructed, and the graph‐theory method was employed to calculate network centrality in 100 healthy young adults from the Human Connectome Project. Specifically, functional connectivity strength (FCS), also known as the “degree centrality” of weighted networks, is calculated to measure functional network centrality. A multivariate technique of partial least squares regression (PLSR) was then conducted to identify genes whose spatial expression profiles best predicted the FCS distribution. We found that FCS spatial distribution was significantly positively correlated with the expression of genes defined by the first PLSR component. The FCS‐related genes we identified were significantly enriched for ion channels, axon guidance, and synaptic transmission. Moreover, FCS‐related genes were preferentially expressed in cortical neurons and young adulthood and were enriched in numerous neurodegenerative and neuropsychiatric disorders. Furthermore, a series of validation and robustness analyses demonstrated the reliability of the results. Overall, our results suggest that the spatial distribution of FCS is modulated by the expression of a set of genes associated with ion channels, axon guidance, and synaptic transmission. John Wiley & Sons, Inc. 2021-02-11 /pmc/articles/PMC8046072/ /pubmed/33570215 http://dx.doi.org/10.1002/hbm.25362 Text en © 2021 The Authors. Human Brain Mapping published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Research Articles Zhu, Dan Yuan, Tengfei Gao, Junfeng Xu, Qiang Xue, Kaizhong Zhu, Wenshuang Tang, Jie Liu, Feng Wang, Junping Yu, Chunshui Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults |
title | Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults |
title_full | Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults |
title_fullStr | Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults |
title_full_unstemmed | Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults |
title_short | Correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults |
title_sort | correlation between cortical gene expression and resting‐state functional network centrality in healthy young adults |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8046072/ https://www.ncbi.nlm.nih.gov/pubmed/33570215 http://dx.doi.org/10.1002/hbm.25362 |
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