Cargando…
Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma
Dabrafenib resistance is a significant problem in melanoma, and its underlying molecular mechanism is still unclear. The purpose of this study is to research the molecular mechanism of drug resistance of dabrafenib and to explore the key genes and pathways that mediate drug resistance in melanoma. G...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8046546/ https://www.ncbi.nlm.nih.gov/pubmed/33880366 http://dx.doi.org/10.1155/2021/5524486 |
_version_ | 1783678872541200384 |
---|---|
author | Gao, Guangyu Yao, Zhen Shen, Jiaofeng Liu, Yulong |
author_facet | Gao, Guangyu Yao, Zhen Shen, Jiaofeng Liu, Yulong |
author_sort | Gao, Guangyu |
collection | PubMed |
description | Dabrafenib resistance is a significant problem in melanoma, and its underlying molecular mechanism is still unclear. The purpose of this study is to research the molecular mechanism of drug resistance of dabrafenib and to explore the key genes and pathways that mediate drug resistance in melanoma. GSE117666 was downloaded from the Gene Expression Omnibus (GEO) database and 492 melanoma statistics were also downloaded from The Cancer Genome Atlas (TCGA) database. Besides, differentially expressed miRNAs (DEMs) were identified by taking advantage of the R software and GEO2R. The Database for Annotation, Visualization, and Integrated Discovery (DAVID) and FunRich was used to perform Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis to identify potential pathways and functional annotations linked with melanoma chemoresistance. 9 DEMs and 872 mRNAs were selected after filtering. Then, target genes were uploaded to Metascape to construct protein-protein interaction (PPI) network. Also, 6 hub mRNAs were screened after performing the PPI network. Furthermore, a total of 4 out of 9 miRNAs had an obvious association with the survival rate (P < 0.05) and showed a good power of risk prediction model of over survival. The present research may provide a deeper understanding of regulatory genes of dabrafenib resistance in melanoma. |
format | Online Article Text |
id | pubmed-8046546 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-80465462021-04-19 Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma Gao, Guangyu Yao, Zhen Shen, Jiaofeng Liu, Yulong Biomed Res Int Research Article Dabrafenib resistance is a significant problem in melanoma, and its underlying molecular mechanism is still unclear. The purpose of this study is to research the molecular mechanism of drug resistance of dabrafenib and to explore the key genes and pathways that mediate drug resistance in melanoma. GSE117666 was downloaded from the Gene Expression Omnibus (GEO) database and 492 melanoma statistics were also downloaded from The Cancer Genome Atlas (TCGA) database. Besides, differentially expressed miRNAs (DEMs) were identified by taking advantage of the R software and GEO2R. The Database for Annotation, Visualization, and Integrated Discovery (DAVID) and FunRich was used to perform Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis to identify potential pathways and functional annotations linked with melanoma chemoresistance. 9 DEMs and 872 mRNAs were selected after filtering. Then, target genes were uploaded to Metascape to construct protein-protein interaction (PPI) network. Also, 6 hub mRNAs were screened after performing the PPI network. Furthermore, a total of 4 out of 9 miRNAs had an obvious association with the survival rate (P < 0.05) and showed a good power of risk prediction model of over survival. The present research may provide a deeper understanding of regulatory genes of dabrafenib resistance in melanoma. Hindawi 2021-04-05 /pmc/articles/PMC8046546/ /pubmed/33880366 http://dx.doi.org/10.1155/2021/5524486 Text en Copyright © 2021 Guangyu Gao et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Gao, Guangyu Yao, Zhen Shen, Jiaofeng Liu, Yulong Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma |
title | Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma |
title_full | Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma |
title_fullStr | Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma |
title_full_unstemmed | Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma |
title_short | Identification of Key miRNAs in the Treatment of Dabrafenib-Resistant Melanoma |
title_sort | identification of key mirnas in the treatment of dabrafenib-resistant melanoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8046546/ https://www.ncbi.nlm.nih.gov/pubmed/33880366 http://dx.doi.org/10.1155/2021/5524486 |
work_keys_str_mv | AT gaoguangyu identificationofkeymirnasinthetreatmentofdabrafenibresistantmelanoma AT yaozhen identificationofkeymirnasinthetreatmentofdabrafenibresistantmelanoma AT shenjiaofeng identificationofkeymirnasinthetreatmentofdabrafenibresistantmelanoma AT liuyulong identificationofkeymirnasinthetreatmentofdabrafenibresistantmelanoma |