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Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem

This retrospective investigation has established that the early theoretical attempts to directly incorporate the consequences of radial dilution into expressions for variation of the sedimentation coefficient as a function of the loading concentration in sedimentation velocity experiments require co...

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Autores principales: Winzor, Donald J., Dinu, Vlad, Scott, David J., Harding, Stephen E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8046895/
https://www.ncbi.nlm.nih.gov/pubmed/33936319
http://dx.doi.org/10.1007/s12551-021-00793-x
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author Winzor, Donald J.
Dinu, Vlad
Scott, David J.
Harding, Stephen E.
author_facet Winzor, Donald J.
Dinu, Vlad
Scott, David J.
Harding, Stephen E.
author_sort Winzor, Donald J.
collection PubMed
description This retrospective investigation has established that the early theoretical attempts to directly incorporate the consequences of radial dilution into expressions for variation of the sedimentation coefficient as a function of the loading concentration in sedimentation velocity experiments require concentration distributions exhibiting far greater precision than that achieved by the optical systems of past and current analytical ultracentrifuges. In terms of current methods of sedimentation coefficient measurement, until such improvement is made, the simplest procedure for quantifying linear s-c dependence (or linear concentration dependence of 1/s) for dilute systems therefore entails consideration of the sedimentation coefficient obtained by standard c(s), g*(s) or G(s) analysis) as an average parameter ([Formula: see text] ) that pertains to the corresponding mean plateau concentration (following radial dilution) ([Formula: see text] ) over the range of sedimentation velocity distributions used for the determination of [Formula: see text] . The relation of this with current descriptions of the concentration dependence of the sedimentation and translational diffusion coefficients is considered, together with a suggestion for the necessary improvement in the optical system.
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spelling pubmed-80468952021-04-30 Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem Winzor, Donald J. Dinu, Vlad Scott, David J. Harding, Stephen E. Biophys Rev Review This retrospective investigation has established that the early theoretical attempts to directly incorporate the consequences of radial dilution into expressions for variation of the sedimentation coefficient as a function of the loading concentration in sedimentation velocity experiments require concentration distributions exhibiting far greater precision than that achieved by the optical systems of past and current analytical ultracentrifuges. In terms of current methods of sedimentation coefficient measurement, until such improvement is made, the simplest procedure for quantifying linear s-c dependence (or linear concentration dependence of 1/s) for dilute systems therefore entails consideration of the sedimentation coefficient obtained by standard c(s), g*(s) or G(s) analysis) as an average parameter ([Formula: see text] ) that pertains to the corresponding mean plateau concentration (following radial dilution) ([Formula: see text] ) over the range of sedimentation velocity distributions used for the determination of [Formula: see text] . The relation of this with current descriptions of the concentration dependence of the sedimentation and translational diffusion coefficients is considered, together with a suggestion for the necessary improvement in the optical system. Springer Berlin Heidelberg 2021-04-10 /pmc/articles/PMC8046895/ /pubmed/33936319 http://dx.doi.org/10.1007/s12551-021-00793-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Review
Winzor, Donald J.
Dinu, Vlad
Scott, David J.
Harding, Stephen E.
Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem
title Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem
title_full Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem
title_fullStr Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem
title_full_unstemmed Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem
title_short Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem
title_sort quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8046895/
https://www.ncbi.nlm.nih.gov/pubmed/33936319
http://dx.doi.org/10.1007/s12551-021-00793-x
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