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The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing

OBJECTIVES: The study aims to generate the whole genome sequence of L. monocytogenes strain S2542 and to compare it to the genomes of strains RO15 and ScottA. In addition, we aimed to compare gene expression profiles of L. monocytogenes strains S2542, ScottA and RO15 after high-pressure processing (...

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Autores principales: Duru, Ilhan Cem, Bucur, Florentina Ionela, Andreevskaya, Margarita, Ylinen, Anne, Crauwels, Peter, Grigore-Gurgu, Leontina, Nikparvar, Bahareh, Rode, Tone Mari, Laine, Pia, Paulin, Lars, Løvdal, Trond, Riedel, Christian U., Bar, Nadav, Borda, Daniela, Nicolau, Anca Ioana, Auvinen, Petri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8048338/
https://www.ncbi.nlm.nih.gov/pubmed/33858503
http://dx.doi.org/10.1186/s13104-021-05555-2
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author Duru, Ilhan Cem
Bucur, Florentina Ionela
Andreevskaya, Margarita
Ylinen, Anne
Crauwels, Peter
Grigore-Gurgu, Leontina
Nikparvar, Bahareh
Rode, Tone Mari
Laine, Pia
Paulin, Lars
Løvdal, Trond
Riedel, Christian U.
Bar, Nadav
Borda, Daniela
Nicolau, Anca Ioana
Auvinen, Petri
author_facet Duru, Ilhan Cem
Bucur, Florentina Ionela
Andreevskaya, Margarita
Ylinen, Anne
Crauwels, Peter
Grigore-Gurgu, Leontina
Nikparvar, Bahareh
Rode, Tone Mari
Laine, Pia
Paulin, Lars
Løvdal, Trond
Riedel, Christian U.
Bar, Nadav
Borda, Daniela
Nicolau, Anca Ioana
Auvinen, Petri
author_sort Duru, Ilhan Cem
collection PubMed
description OBJECTIVES: The study aims to generate the whole genome sequence of L. monocytogenes strain S2542 and to compare it to the genomes of strains RO15 and ScottA. In addition, we aimed to compare gene expression profiles of L. monocytogenes strains S2542, ScottA and RO15 after high-pressure processing (HPP) using ddPCR. RESULTS: The whole genome sequence of L. monocytogenes S2542 indicates that this strain belongs to serotype 4b, in contrast to the previously reported serotype 1/2a. Strain S2542 appears to be more susceptible to the treatment at 400 MPa compared to RO15 and ScottA strains. In contrast to RO15 and ScottA strains, viable cell counts of strain S2542 were below the limit of detection after HPP (400 MPa/8 min) when stored at 8 °C for 24 and 48 h. The transcriptional response of all three strains to HPP was not significantly different. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13104-021-05555-2.
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spelling pubmed-80483382021-04-15 The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing Duru, Ilhan Cem Bucur, Florentina Ionela Andreevskaya, Margarita Ylinen, Anne Crauwels, Peter Grigore-Gurgu, Leontina Nikparvar, Bahareh Rode, Tone Mari Laine, Pia Paulin, Lars Løvdal, Trond Riedel, Christian U. Bar, Nadav Borda, Daniela Nicolau, Anca Ioana Auvinen, Petri BMC Res Notes Research Note OBJECTIVES: The study aims to generate the whole genome sequence of L. monocytogenes strain S2542 and to compare it to the genomes of strains RO15 and ScottA. In addition, we aimed to compare gene expression profiles of L. monocytogenes strains S2542, ScottA and RO15 after high-pressure processing (HPP) using ddPCR. RESULTS: The whole genome sequence of L. monocytogenes S2542 indicates that this strain belongs to serotype 4b, in contrast to the previously reported serotype 1/2a. Strain S2542 appears to be more susceptible to the treatment at 400 MPa compared to RO15 and ScottA strains. In contrast to RO15 and ScottA strains, viable cell counts of strain S2542 were below the limit of detection after HPP (400 MPa/8 min) when stored at 8 °C for 24 and 48 h. The transcriptional response of all three strains to HPP was not significantly different. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13104-021-05555-2. BioMed Central 2021-04-15 /pmc/articles/PMC8048338/ /pubmed/33858503 http://dx.doi.org/10.1186/s13104-021-05555-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Note
Duru, Ilhan Cem
Bucur, Florentina Ionela
Andreevskaya, Margarita
Ylinen, Anne
Crauwels, Peter
Grigore-Gurgu, Leontina
Nikparvar, Bahareh
Rode, Tone Mari
Laine, Pia
Paulin, Lars
Løvdal, Trond
Riedel, Christian U.
Bar, Nadav
Borda, Daniela
Nicolau, Anca Ioana
Auvinen, Petri
The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing
title The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing
title_full The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing
title_fullStr The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing
title_full_unstemmed The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing
title_short The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing
title_sort complete genome sequence of listeria monocytogenes strain s2542 and expression of selected genes under high-pressure processing
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8048338/
https://www.ncbi.nlm.nih.gov/pubmed/33858503
http://dx.doi.org/10.1186/s13104-021-05555-2
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