Cargando…

Improving the completeness of public metadata accompanying omics studies

Detalles Bibliográficos
Autores principales:	Rajesh, Anushka, Chang, Yutong, Abedalthagafi, Malak S., Wong-Beringer, Annie, Love, Michael I., Mangul, Serghei
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Editorial
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8048353/ https://www.ncbi.nlm.nih.gov/pubmed/33858487 http://dx.doi.org/10.1186/s13059-021-02332-z

Ejemplares similares

Improving the usability and archival stability of bioinformatics software
por: Mangul, Serghei, et al.
Publicado: (2019)

Omics Metadata Management Software (OMMS)
por: Perez-Arriaga, Martha O, et al.
Publicado: (2015)

Systematic benchmarking of omics computational tools
por: Mangul, Serghei, et al.
Publicado: (2019)

The Genomic Landscape of Colorectal Cancer in the Saudi Arabian Population Using a Comprehensive Genomic Panel
por: Alsolme, Ebtehal, et al.
Publicado: (2023)

A streamlined workflow for conversion, peer review, and publication of genomics metadata as omics data papers
por: Dimitrova, Mariya, et al.
Publicado: (2021)

Assessing Public Metabolomics Metadata, Towards Improving Quality
por: Ferreira, João D., et al.
Publicado: (2017)

FAIR data station for lightweight metadata management and validation of omics studies
por: Nijsse, Bart, et al.
Publicado: (2023)

PUblications Metadata Augmentation (PUMA) pipeline
por: Butters, Oliver W., et al.
Publicado: (2021)

Challenges and recommendations to improve the installability and archival stability of omics computational tools
por: Mangul, Serghei, et al.
Publicado: (2019)

Improving the usability and comprehensiveness of microbial databases
por: Loeffler, Caitlin, et al.
Publicado: (2020)

Correction to: Improving the usability and comprehensiveness of microbial databases
por: Loeffler, Caitlin, et al.
Publicado: (2020)

A programmatic view of metadata, metadata services, and metadata flow in ATLAS
por: Malon, D, et al.
Publicado: (2012)

A Programmatic View of Metadata, Metadata Services, and Metadata Flow in ATLAS
por: Malon, D, et al.
Publicado: (2012)

A Programmatic View of Metadata, Metadata Services, and Metadata Flow in ATLAS
por: Malon, David
Publicado: (2012)

RGMQL: scalable and interoperable computing of heterogeneous omics big data and metadata in R/Bioconductor
por: Pallotta, Simone, et al.
Publicado: (2022)

Analytical code sharing practices in biomedical research
por: Sharma, Nitesh Kumar, et al.
Publicado: (2023)

Metadata
por: Zeng, Marcia Lei, et al.
Publicado: (2016)

Metadata
por: Pomerantz, Jeffrey
Publicado: (2015)

Predicting structured metadata from unstructured metadata
por: Posch, Lisa, et al.
Publicado: (2016)

Predicting structured metadata from unstructured metadata
por: Posch, Lisa, et al.
Publicado: (2016)

TAMPA: interpretable analysis and visualization of metagenomics-based taxon abundance profiles
por: Sarwal, Varuni, et al.
Publicado: (2023)

Constitutional mismatch repair-deficiency: current problems and emerging therapeutic strategies
por: Abedalthagafi, Malak
Publicado: (2018)

Editorial: Genomics and Epigenomics of Cancer Immunotherapy: Challenges and Clinical Implications
por: Abedalthagafi, Malak
Publicado: (2021)

Metadata harmonization–Standards are the key for a better usage of omics data for integrative microbiome analysis
por: Cernava, Tomislav, et al.
Publicado: (2022)

Methods, models, mechanisms and metadata: Introducing the Nanotoxicology collection at F1000Research
por: Lynch, Iseult, et al.
Publicado: (2021)

ATLAS Metadata Interfaces (AMI) and ATLAS Metadata Catalogs
por: Fulachier, J, et al.
Publicado: (2005)

Estimation of alternative splicing isoform frequencies from RNA-Seq data
por: Nicolae, Marius, et al.
Publicado: (2011)

Hidden treasures in contemporary RNA sequencing
por: Mangul, Serghei, et al.
Publicado: (2019)

Facilitating author-driven, machine-readable descriptions with the new minISA metadata format
Publicado: (2020)

The metadata handbook
por: Register, Renee, et al.
Publicado: (2015)

Metadata for ATLAS
por: Costanzo, D, et al.
Publicado: (2007)

ATLAS Metadata Interface (AMI), a generic metadata framework
por: Fulachier, Jerome, et al.
Publicado: (2016)

ATLAS Metadata Interface (AMI), a generic metadata framework
por: Fulachier, Jerome, et al.
Publicado: (2017)

Global Research on Coronaviruses: Metadata-Based Analysis for Public Health Policies
por: Warin, Thierry
Publicado: (2021)

Critical assessment of chromatographic metadata in publicly available metabolomics data repositories
por: Harrieder, Eva-Maria, et al.
Publicado: (2022)

Radiation-induced glioma following CyberKnife® treatment of metastatic renal cell carcinoma: a case report
por: Abedalthagafi, Malak, et al.
Publicado: (2012)

The History and Challenges of Women in Genetics: A Focus on Non-Western Women
por: Elbardisy, Hadeel, et al.
Publicado: (2021)

Log-Less Metadata Management on Metadata Server for Parallel File Systems
por: Liao, Jianwei, et al.
Publicado: (2014)

TRIP: a method for novel transcript reconstruction from paired-end RNA-seq reads
por: Mangul, Serghei, et al.
Publicado: (2012)

Metalign: efficient alignment-based metagenomic profiling via containment min hash
por: LaPierre, Nathan, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_qb4m4k13ietaosiqe3osglsd99