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Interpretable Feature Generation in ECG Using a Variational Autoencoder
We propose a method for generating an electrocardiogram (ECG) signal for one cardiac cycle using a variational autoencoder. Our goal was to encode the original ECG signal using as few features as possible. Using this method we extracted a vector of new 25 features, which in many cases can be interpr...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8049433/ https://www.ncbi.nlm.nih.gov/pubmed/33868375 http://dx.doi.org/10.3389/fgene.2021.638191 |
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author | Kuznetsov, V. V. Moskalenko, V. A. Gribanov, D. V. Zolotykh, Nikolai Yu. |
author_facet | Kuznetsov, V. V. Moskalenko, V. A. Gribanov, D. V. Zolotykh, Nikolai Yu. |
author_sort | Kuznetsov, V. V. |
collection | PubMed |
description | We propose a method for generating an electrocardiogram (ECG) signal for one cardiac cycle using a variational autoencoder. Our goal was to encode the original ECG signal using as few features as possible. Using this method we extracted a vector of new 25 features, which in many cases can be interpreted. The generated ECG has quite natural appearance. The low value of the Maximum Mean Discrepancy metric, 3.83 × 10(−3), indicates good quality of ECG generation too. The extracted new features will help to improve the quality of automatic diagnostics of cardiovascular diseases. Generating new synthetic ECGs will allow us to solve the issue of the lack of labeled ECG for using them in supervised learning. |
format | Online Article Text |
id | pubmed-8049433 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80494332021-04-16 Interpretable Feature Generation in ECG Using a Variational Autoencoder Kuznetsov, V. V. Moskalenko, V. A. Gribanov, D. V. Zolotykh, Nikolai Yu. Front Genet Genetics We propose a method for generating an electrocardiogram (ECG) signal for one cardiac cycle using a variational autoencoder. Our goal was to encode the original ECG signal using as few features as possible. Using this method we extracted a vector of new 25 features, which in many cases can be interpreted. The generated ECG has quite natural appearance. The low value of the Maximum Mean Discrepancy metric, 3.83 × 10(−3), indicates good quality of ECG generation too. The extracted new features will help to improve the quality of automatic diagnostics of cardiovascular diseases. Generating new synthetic ECGs will allow us to solve the issue of the lack of labeled ECG for using them in supervised learning. Frontiers Media S.A. 2021-04-01 /pmc/articles/PMC8049433/ /pubmed/33868375 http://dx.doi.org/10.3389/fgene.2021.638191 Text en Copyright © 2021 Kuznetsov, Moskalenko, Gribanov and Zolotykh. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Kuznetsov, V. V. Moskalenko, V. A. Gribanov, D. V. Zolotykh, Nikolai Yu. Interpretable Feature Generation in ECG Using a Variational Autoencoder |
title | Interpretable Feature Generation in ECG Using a Variational Autoencoder |
title_full | Interpretable Feature Generation in ECG Using a Variational Autoencoder |
title_fullStr | Interpretable Feature Generation in ECG Using a Variational Autoencoder |
title_full_unstemmed | Interpretable Feature Generation in ECG Using a Variational Autoencoder |
title_short | Interpretable Feature Generation in ECG Using a Variational Autoencoder |
title_sort | interpretable feature generation in ecg using a variational autoencoder |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8049433/ https://www.ncbi.nlm.nih.gov/pubmed/33868375 http://dx.doi.org/10.3389/fgene.2021.638191 |
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