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Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle
Radiomic image features are becoming a promising non-invasive method to obtain quantitative measurements for tumour classification and therapy response assessment in oncological research. However, despite its increasingly established application, there is a need for standardisation criteria and furt...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050292/ https://www.ncbi.nlm.nih.gov/pubmed/33859265 http://dx.doi.org/10.1038/s41598-021-87598-w |
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author | Escudero Sanchez, Lorena Rundo, Leonardo Gill, Andrew B. Hoare, Matthew Mendes Serrao, Eva Sala, Evis |
author_facet | Escudero Sanchez, Lorena Rundo, Leonardo Gill, Andrew B. Hoare, Matthew Mendes Serrao, Eva Sala, Evis |
author_sort | Escudero Sanchez, Lorena |
collection | PubMed |
description | Radiomic image features are becoming a promising non-invasive method to obtain quantitative measurements for tumour classification and therapy response assessment in oncological research. However, despite its increasingly established application, there is a need for standardisation criteria and further validation of feature robustness with respect to imaging acquisition parameters. In this paper, the robustness of radiomic features extracted from computed tomography (CT) images is evaluated for liver tumour and muscle, comparing the values of the features in images reconstructed with two different slice thicknesses of 2.0 mm and 5.0 mm. Novel approaches are presented to address the intrinsic dependencies of texture radiomic features, choosing the optimal number of grey levels and correcting for the dependency on volume. With the optimal values and corrections, feature values are compared across thicknesses to identify reproducible features. Normalisation using muscle regions is also described as an alternative approach. With either method, a large fraction of features (75–90%) was found to be highly robust (< 25% difference). The analyses were performed on a homogeneous CT dataset of 43 patients with hepatocellular carcinoma, and consistent results were obtained for both tumour and muscle tissue. Finally, recommended guidelines are included for radiomic studies using variable slice thickness. |
format | Online Article Text |
id | pubmed-8050292 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80502922021-04-16 Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle Escudero Sanchez, Lorena Rundo, Leonardo Gill, Andrew B. Hoare, Matthew Mendes Serrao, Eva Sala, Evis Sci Rep Article Radiomic image features are becoming a promising non-invasive method to obtain quantitative measurements for tumour classification and therapy response assessment in oncological research. However, despite its increasingly established application, there is a need for standardisation criteria and further validation of feature robustness with respect to imaging acquisition parameters. In this paper, the robustness of radiomic features extracted from computed tomography (CT) images is evaluated for liver tumour and muscle, comparing the values of the features in images reconstructed with two different slice thicknesses of 2.0 mm and 5.0 mm. Novel approaches are presented to address the intrinsic dependencies of texture radiomic features, choosing the optimal number of grey levels and correcting for the dependency on volume. With the optimal values and corrections, feature values are compared across thicknesses to identify reproducible features. Normalisation using muscle regions is also described as an alternative approach. With either method, a large fraction of features (75–90%) was found to be highly robust (< 25% difference). The analyses were performed on a homogeneous CT dataset of 43 patients with hepatocellular carcinoma, and consistent results were obtained for both tumour and muscle tissue. Finally, recommended guidelines are included for radiomic studies using variable slice thickness. Nature Publishing Group UK 2021-04-15 /pmc/articles/PMC8050292/ /pubmed/33859265 http://dx.doi.org/10.1038/s41598-021-87598-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Escudero Sanchez, Lorena Rundo, Leonardo Gill, Andrew B. Hoare, Matthew Mendes Serrao, Eva Sala, Evis Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle |
title | Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle |
title_full | Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle |
title_fullStr | Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle |
title_full_unstemmed | Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle |
title_short | Robustness of radiomic features in CT images with different slice thickness, comparing liver tumour and muscle |
title_sort | robustness of radiomic features in ct images with different slice thickness, comparing liver tumour and muscle |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050292/ https://www.ncbi.nlm.nih.gov/pubmed/33859265 http://dx.doi.org/10.1038/s41598-021-87598-w |
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