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A unified survival-analysis approach to insect population development and survival times
There are two major categories of observation data in studying time-dependent processes: one is the time-series data, and the other is the perhaps lesser-recognized but similarly prevalent time-to-event data (also known as survival or failure time). Examples in entomology include molting times and d...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050314/ https://www.ncbi.nlm.nih.gov/pubmed/33859237 http://dx.doi.org/10.1038/s41598-021-87264-1 |
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author | Ma, Zhanshan (Sam) |
author_facet | Ma, Zhanshan (Sam) |
author_sort | Ma, Zhanshan (Sam) |
collection | PubMed |
description | There are two major categories of observation data in studying time-dependent processes: one is the time-series data, and the other is the perhaps lesser-recognized but similarly prevalent time-to-event data (also known as survival or failure time). Examples in entomology include molting times and death times of insects, waiting times of predators before the next attack or the hiding times of preys. A particular challenge in analyzing time-to-event data is the observation censoring, or the incomplete observation of survival times, dealing which is a unique advantage of survival analysis statistics. Even with a perfectly designed experiment being conducted perfectly, such ‘naturally’ censoring may still be unavoidable due to the natural processes, including the premature death in the observation of insect development, the variability in instarship, or simply the continuous nature of time process and the discrete nature of sampling intervals. Here we propose to apply the classic Cox proportional hazards model for modeling both insect development and survival rates (probabilities) with a unified survival analysis approach. We demonstrated the advantages of the proposed approach with the development and survival datasets of 1800 Russian wheat aphids from their births to deaths, observed under 25 laboratory treatments of temperatures and plant growth stages. |
format | Online Article Text |
id | pubmed-8050314 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80503142021-04-16 A unified survival-analysis approach to insect population development and survival times Ma, Zhanshan (Sam) Sci Rep Article There are two major categories of observation data in studying time-dependent processes: one is the time-series data, and the other is the perhaps lesser-recognized but similarly prevalent time-to-event data (also known as survival or failure time). Examples in entomology include molting times and death times of insects, waiting times of predators before the next attack or the hiding times of preys. A particular challenge in analyzing time-to-event data is the observation censoring, or the incomplete observation of survival times, dealing which is a unique advantage of survival analysis statistics. Even with a perfectly designed experiment being conducted perfectly, such ‘naturally’ censoring may still be unavoidable due to the natural processes, including the premature death in the observation of insect development, the variability in instarship, or simply the continuous nature of time process and the discrete nature of sampling intervals. Here we propose to apply the classic Cox proportional hazards model for modeling both insect development and survival rates (probabilities) with a unified survival analysis approach. We demonstrated the advantages of the proposed approach with the development and survival datasets of 1800 Russian wheat aphids from their births to deaths, observed under 25 laboratory treatments of temperatures and plant growth stages. Nature Publishing Group UK 2021-04-15 /pmc/articles/PMC8050314/ /pubmed/33859237 http://dx.doi.org/10.1038/s41598-021-87264-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ma, Zhanshan (Sam) A unified survival-analysis approach to insect population development and survival times |
title | A unified survival-analysis approach to insect population development and survival times |
title_full | A unified survival-analysis approach to insect population development and survival times |
title_fullStr | A unified survival-analysis approach to insect population development and survival times |
title_full_unstemmed | A unified survival-analysis approach to insect population development and survival times |
title_short | A unified survival-analysis approach to insect population development and survival times |
title_sort | unified survival-analysis approach to insect population development and survival times |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050314/ https://www.ncbi.nlm.nih.gov/pubmed/33859237 http://dx.doi.org/10.1038/s41598-021-87264-1 |
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