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Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil

The spatial structure of soil CO(2) emission (FCO(2)) and soil attributes are affected by different factors in a highly complex way. In this context, this study aimed to characterize the spatial variability patterns of FCO(2) and soil physical, chemical, and microbiological attributes in a sugarcane...

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Autores principales: Moitinho, Mara Regina, Teixeira, Daniel De Bortoli, Bicalho, Elton da Silva, Panosso, Alan Rodrigo, Ferraudo, Antonio Sergio, Pereira, Gener Tadeu, Tsai, Siu Mui, Borges, Beatriz Maria Ferrari, La Scala Jr., Newton
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050326/
https://www.ncbi.nlm.nih.gov/pubmed/33859219
http://dx.doi.org/10.1038/s41598-021-87479-2
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author Moitinho, Mara Regina
Teixeira, Daniel De Bortoli
Bicalho, Elton da Silva
Panosso, Alan Rodrigo
Ferraudo, Antonio Sergio
Pereira, Gener Tadeu
Tsai, Siu Mui
Borges, Beatriz Maria Ferrari
La Scala Jr., Newton
author_facet Moitinho, Mara Regina
Teixeira, Daniel De Bortoli
Bicalho, Elton da Silva
Panosso, Alan Rodrigo
Ferraudo, Antonio Sergio
Pereira, Gener Tadeu
Tsai, Siu Mui
Borges, Beatriz Maria Ferrari
La Scala Jr., Newton
author_sort Moitinho, Mara Regina
collection PubMed
description The spatial structure of soil CO(2) emission (FCO(2)) and soil attributes are affected by different factors in a highly complex way. In this context, this study aimed to characterize the spatial variability patterns of FCO(2) and soil physical, chemical, and microbiological attributes in a sugarcane field area after reform activities. The study was conducted in an Oxisol with the measurement of FCO(2), soil temperature (Ts), and soil moisture (Ms) in a regular 90 × 90-m grid with 100 sampling points. Soil samples were collected at each sampling point at a depth of 0–0.20 m to determine soil physical (density, macroporosity, and microporosity), particle size (sand, silt, and clay), and chemical attributes (soil organic matter, pH, P, K, Ca, Mg, Al, H + Al, cation exchange capacity, and base saturation). Geostatistical analyses were performed to assess the spatial variability and map soil attributes. Two regions (R1 and R2) with contrasting emission values were identified after mapping FCO(2). The abundance of bacterial 16S rRNA, pmoA, and nifH genes, determined by real-time quantitative PCR (qPCR), enzymatic activity (dehydrogenase, urease, cellulase, and amylase), and microbial biomass carbon were determined in R1 and R2. The mean values of FCO(2) (2.91 µmol m(−2) s(−1)), Ts (22.6 °C), and Ms (16.9%) over the 28-day period were similar to those observed in studies also conducted under Oxisols in sugarcane areas and conventional soil tillage. The spatial pattern of FCO(2) was similar to that of macropores, air-filled pore space, silt content, soil organic matter, and soil carbon decay constant. No significant difference was observed between R1 and R2 for the copy number of bacterial 16S rRNA and nifH genes, but the results of qPCR for the pmoA gene presented differences (p < 0.01) between regions. The region R1, with the highest FCO(2) (2.9 to 4.2 µmol m(−2) s(−1)), showed higher enzymatic activity of dehydrogenase (33.02 µg TPF g(−1) dry soil 24 h(−1)), urease (41.15 µg NH(4)–N g(−1) dry soil 3 h(−1)), amylase (73.84 µg glucose g(−1) dry soil 24 h(−1)), and microbial biomass carbon (41.35 µg C g(−1) soil) than R2, which had the lowest emission (1.9 to 2.7 µmol m(−2) s(−1)). In addition, the soil C/N ratio was higher in R2 (15.43) than in R1 (12.18). The spatial pattern of FCO(2) in R1 and R2 may not be directly related to the total amount of the microbial community (bacterial 16S rRNA) in the soil but to the specific function that these microorganisms play regarding soil carbon degradation (pmoA).
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spelling pubmed-80503262021-04-16 Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil Moitinho, Mara Regina Teixeira, Daniel De Bortoli Bicalho, Elton da Silva Panosso, Alan Rodrigo Ferraudo, Antonio Sergio Pereira, Gener Tadeu Tsai, Siu Mui Borges, Beatriz Maria Ferrari La Scala Jr., Newton Sci Rep Article The spatial structure of soil CO(2) emission (FCO(2)) and soil attributes are affected by different factors in a highly complex way. In this context, this study aimed to characterize the spatial variability patterns of FCO(2) and soil physical, chemical, and microbiological attributes in a sugarcane field area after reform activities. The study was conducted in an Oxisol with the measurement of FCO(2), soil temperature (Ts), and soil moisture (Ms) in a regular 90 × 90-m grid with 100 sampling points. Soil samples were collected at each sampling point at a depth of 0–0.20 m to determine soil physical (density, macroporosity, and microporosity), particle size (sand, silt, and clay), and chemical attributes (soil organic matter, pH, P, K, Ca, Mg, Al, H + Al, cation exchange capacity, and base saturation). Geostatistical analyses were performed to assess the spatial variability and map soil attributes. Two regions (R1 and R2) with contrasting emission values were identified after mapping FCO(2). The abundance of bacterial 16S rRNA, pmoA, and nifH genes, determined by real-time quantitative PCR (qPCR), enzymatic activity (dehydrogenase, urease, cellulase, and amylase), and microbial biomass carbon were determined in R1 and R2. The mean values of FCO(2) (2.91 µmol m(−2) s(−1)), Ts (22.6 °C), and Ms (16.9%) over the 28-day period were similar to those observed in studies also conducted under Oxisols in sugarcane areas and conventional soil tillage. The spatial pattern of FCO(2) was similar to that of macropores, air-filled pore space, silt content, soil organic matter, and soil carbon decay constant. No significant difference was observed between R1 and R2 for the copy number of bacterial 16S rRNA and nifH genes, but the results of qPCR for the pmoA gene presented differences (p < 0.01) between regions. The region R1, with the highest FCO(2) (2.9 to 4.2 µmol m(−2) s(−1)), showed higher enzymatic activity of dehydrogenase (33.02 µg TPF g(−1) dry soil 24 h(−1)), urease (41.15 µg NH(4)–N g(−1) dry soil 3 h(−1)), amylase (73.84 µg glucose g(−1) dry soil 24 h(−1)), and microbial biomass carbon (41.35 µg C g(−1) soil) than R2, which had the lowest emission (1.9 to 2.7 µmol m(−2) s(−1)). In addition, the soil C/N ratio was higher in R2 (15.43) than in R1 (12.18). The spatial pattern of FCO(2) in R1 and R2 may not be directly related to the total amount of the microbial community (bacterial 16S rRNA) in the soil but to the specific function that these microorganisms play regarding soil carbon degradation (pmoA). Nature Publishing Group UK 2021-04-15 /pmc/articles/PMC8050326/ /pubmed/33859219 http://dx.doi.org/10.1038/s41598-021-87479-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Moitinho, Mara Regina
Teixeira, Daniel De Bortoli
Bicalho, Elton da Silva
Panosso, Alan Rodrigo
Ferraudo, Antonio Sergio
Pereira, Gener Tadeu
Tsai, Siu Mui
Borges, Beatriz Maria Ferrari
La Scala Jr., Newton
Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil
title Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil
title_full Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil
title_fullStr Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil
title_full_unstemmed Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil
title_short Soil CO(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil
title_sort soil co(2) emission and soil attributes associated with the microbiota of a sugarcane area in southern brazil
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050326/
https://www.ncbi.nlm.nih.gov/pubmed/33859219
http://dx.doi.org/10.1038/s41598-021-87479-2
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