Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019

Here, using a sequence-independent sequencing approach (M. V. Phan, P. Hong Anh, N. Van Cuong, B. Oude Munnink, et al., Virus Evol 2:vew027, 2016, https://doi.org/10.1093/ve/vew027), we determined human astrovirus (HAstV) genome sequences from eight diarrheal stool samples collected in coastal Kenya...

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Detalles Bibliográficos
Autores principales: Lambisia, Arnold W., Phan, My V. T., de Laurent, Zaydah R., Cotten, Matthew, Nokes, D. James, Agoti, Charles N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050968/
https://www.ncbi.nlm.nih.gov/pubmed/33858926
http://dx.doi.org/10.1128/MRA.00162-21
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author Lambisia, Arnold W.
Phan, My V. T.
de Laurent, Zaydah R.
Cotten, Matthew
Nokes, D. James
Agoti, Charles N.
author_facet Lambisia, Arnold W.
Phan, My V. T.
de Laurent, Zaydah R.
Cotten, Matthew
Nokes, D. James
Agoti, Charles N.
author_sort Lambisia, Arnold W.
collection PubMed
description Here, using a sequence-independent sequencing approach (M. V. Phan, P. Hong Anh, N. Van Cuong, B. Oude Munnink, et al., Virus Evol 2:vew027, 2016, https://doi.org/10.1093/ve/vew027), we determined human astrovirus (HAstV) genome sequences from eight diarrheal stool samples collected in coastal Kenya in 2019. Phylogenetic analysis identified the following 4 genotypes: HAstV-1 (n = 4), HAstV-2 (n = 1), HAstV-3 (n = 1), and HAstV-5 (n = 2).
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spelling pubmed-80509682021-05-04 Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019 Lambisia, Arnold W. Phan, My V. T. de Laurent, Zaydah R. Cotten, Matthew Nokes, D. James Agoti, Charles N. Microbiol Resour Announc Genome Sequences Here, using a sequence-independent sequencing approach (M. V. Phan, P. Hong Anh, N. Van Cuong, B. Oude Munnink, et al., Virus Evol 2:vew027, 2016, https://doi.org/10.1093/ve/vew027), we determined human astrovirus (HAstV) genome sequences from eight diarrheal stool samples collected in coastal Kenya in 2019. Phylogenetic analysis identified the following 4 genotypes: HAstV-1 (n = 4), HAstV-2 (n = 1), HAstV-3 (n = 1), and HAstV-5 (n = 2). American Society for Microbiology 2021-04-15 /pmc/articles/PMC8050968/ /pubmed/33858926 http://dx.doi.org/10.1128/MRA.00162-21 Text en Copyright © 2021 Lambisia et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Lambisia, Arnold W.
Phan, My V. T.
de Laurent, Zaydah R.
Cotten, Matthew
Nokes, D. James
Agoti, Charles N.
Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019
title Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019
title_full Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019
title_fullStr Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019
title_full_unstemmed Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019
title_short Near-Complete Genome Sequences of Eight Human Astroviruses Recovered from Diarrheal Stool Samples of Hospitalized Children in Coastal Kenya in 2019
title_sort near-complete genome sequences of eight human astroviruses recovered from diarrheal stool samples of hospitalized children in coastal kenya in 2019
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050968/
https://www.ncbi.nlm.nih.gov/pubmed/33858926
http://dx.doi.org/10.1128/MRA.00162-21
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