Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing

We report here the genome sequences of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants from five coronavirus disease 2019 (COVID-19) patients in Mumbai, India. Viral genomic RNA was isolated from nasopharyngeal swabs and/or respiratory particles from the masks of the patients....

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Autores principales: Nilgiriwala, Kayzad, Mandal, Ayan, Patel, Grishma, Mestry, Tejal, Vaswani, Smriti, Shaikh, Ambreen, Sriraman, Kalpana, Parikh, Swapneil, Udupa, Shreevatsa, Chatterjee, Nirjhar, Shastri, Jayanthi, Mistry, Nerges
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050973/
https://www.ncbi.nlm.nih.gov/pubmed/33858931
http://dx.doi.org/10.1128/MRA.00231-21
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author Nilgiriwala, Kayzad
Mandal, Ayan
Patel, Grishma
Mestry, Tejal
Vaswani, Smriti
Shaikh, Ambreen
Sriraman, Kalpana
Parikh, Swapneil
Udupa, Shreevatsa
Chatterjee, Nirjhar
Shastri, Jayanthi
Mistry, Nerges
author_facet Nilgiriwala, Kayzad
Mandal, Ayan
Patel, Grishma
Mestry, Tejal
Vaswani, Smriti
Shaikh, Ambreen
Sriraman, Kalpana
Parikh, Swapneil
Udupa, Shreevatsa
Chatterjee, Nirjhar
Shastri, Jayanthi
Mistry, Nerges
author_sort Nilgiriwala, Kayzad
collection PubMed
description We report here the genome sequences of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants from five coronavirus disease 2019 (COVID-19) patients in Mumbai, India. Viral genomic RNA was isolated from nasopharyngeal swabs and/or respiratory particles from the masks of the patients. Genomic variant analysis determined 8 to 22 mutations, and the variants belong to lineages previously associated with Indian variants.
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spelling pubmed-80509732021-05-04 Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing Nilgiriwala, Kayzad Mandal, Ayan Patel, Grishma Mestry, Tejal Vaswani, Smriti Shaikh, Ambreen Sriraman, Kalpana Parikh, Swapneil Udupa, Shreevatsa Chatterjee, Nirjhar Shastri, Jayanthi Mistry, Nerges Microbiol Resour Announc Genome Sequences We report here the genome sequences of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants from five coronavirus disease 2019 (COVID-19) patients in Mumbai, India. Viral genomic RNA was isolated from nasopharyngeal swabs and/or respiratory particles from the masks of the patients. Genomic variant analysis determined 8 to 22 mutations, and the variants belong to lineages previously associated with Indian variants. American Society for Microbiology 2021-04-15 /pmc/articles/PMC8050973/ /pubmed/33858931 http://dx.doi.org/10.1128/MRA.00231-21 Text en Copyright © 2021 Nilgiriwala et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Nilgiriwala, Kayzad
Mandal, Ayan
Patel, Grishma
Mestry, Tejal
Vaswani, Smriti
Shaikh, Ambreen
Sriraman, Kalpana
Parikh, Swapneil
Udupa, Shreevatsa
Chatterjee, Nirjhar
Shastri, Jayanthi
Mistry, Nerges
Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing
title Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing
title_full Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing
title_fullStr Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing
title_full_unstemmed Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing
title_short Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing
title_sort genome sequences of five sars-cov-2 variants from mumbai, india, obtained by nanopore sequencing
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050973/
https://www.ncbi.nlm.nih.gov/pubmed/33858931
http://dx.doi.org/10.1128/MRA.00231-21
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