Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri

We present the chromosome sequences of a Naegleria fowleri isolate from a human primary amebic meningoencephalitis (PAM) case. The genome sequences were assembled from Illumina HiSeq and PacBio sequencing data and verified with the optical mapping data. This led to the identification of 37 contigs r...

Descripción completa

Detalles Bibliográficos
Autores principales: Ali, Ibne Karim M., Kelley, Alyssa, Joseph, Sandeep J., Park, Subin, Roy, Shantanu, Jackson, Jonathan, Cope, Jennifer R., Rowe, Lori A., Burroughs, Mark, Sheth, Mili, Batra, Dhwani, Loparev, Vladimir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050977/
https://www.ncbi.nlm.nih.gov/pubmed/33858935
http://dx.doi.org/10.1128/MRA.01034-20
_version_ 1783679672427479040
author Ali, Ibne Karim M.
Kelley, Alyssa
Joseph, Sandeep J.
Park, Subin
Roy, Shantanu
Jackson, Jonathan
Cope, Jennifer R.
Rowe, Lori A.
Burroughs, Mark
Sheth, Mili
Batra, Dhwani
Loparev, Vladimir
author_facet Ali, Ibne Karim M.
Kelley, Alyssa
Joseph, Sandeep J.
Park, Subin
Roy, Shantanu
Jackson, Jonathan
Cope, Jennifer R.
Rowe, Lori A.
Burroughs, Mark
Sheth, Mili
Batra, Dhwani
Loparev, Vladimir
author_sort Ali, Ibne Karim M.
collection PubMed
description We present the chromosome sequences of a Naegleria fowleri isolate from a human primary amebic meningoencephalitis (PAM) case. The genome sequences were assembled from Illumina HiSeq and PacBio sequencing data and verified with the optical mapping data. This led to the identification of 37 contigs representing 37 chromosomes in N. fowleri.
format Online
Article
Text
id pubmed-8050977
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-80509772021-05-04 Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri Ali, Ibne Karim M. Kelley, Alyssa Joseph, Sandeep J. Park, Subin Roy, Shantanu Jackson, Jonathan Cope, Jennifer R. Rowe, Lori A. Burroughs, Mark Sheth, Mili Batra, Dhwani Loparev, Vladimir Microbiol Resour Announc Genome Sequences We present the chromosome sequences of a Naegleria fowleri isolate from a human primary amebic meningoencephalitis (PAM) case. The genome sequences were assembled from Illumina HiSeq and PacBio sequencing data and verified with the optical mapping data. This led to the identification of 37 contigs representing 37 chromosomes in N. fowleri. American Society for Microbiology 2021-04-15 /pmc/articles/PMC8050977/ /pubmed/33858935 http://dx.doi.org/10.1128/MRA.01034-20 Text en https://doi.org/10.1128/AuthorWarrantyLicense.v1This is a work of the U.S. Government and is not subject to copyright protection in the United States. Foreign copyrights may apply.
spellingShingle Genome Sequences
Ali, Ibne Karim M.
Kelley, Alyssa
Joseph, Sandeep J.
Park, Subin
Roy, Shantanu
Jackson, Jonathan
Cope, Jennifer R.
Rowe, Lori A.
Burroughs, Mark
Sheth, Mili
Batra, Dhwani
Loparev, Vladimir
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri
title Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri
title_full Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri
title_fullStr Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri
title_full_unstemmed Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri
title_short Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri
title_sort draft chromosome sequences of a clinical isolate of the free-living ameba naegleria fowleri
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8050977/
https://www.ncbi.nlm.nih.gov/pubmed/33858935
http://dx.doi.org/10.1128/MRA.01034-20
work_keys_str_mv AT aliibnekarimm draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT kelleyalyssa draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT josephsandeepj draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT parksubin draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT royshantanu draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT jacksonjonathan draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT copejenniferr draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT roweloria draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT burroughsmark draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT shethmili draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT batradhwani draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri
AT loparevvladimir draftchromosomesequencesofaclinicalisolateofthefreelivingamebanaegleriafowleri

Ejemplares similares