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Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions
BACKGROUND: Geographically separated population growth of microbes is a common phenomenon in microbial ecology. Colonies are representative of the morphological characteristics of this structured population growth. Pattern formation by single colonies has been intensively studied, whereas the spatia...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8051089/ https://www.ncbi.nlm.nih.gov/pubmed/33858359 http://dx.doi.org/10.1186/s12866-021-02180-8 |
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author | Xue, Heng Kurokawa, Masaomi Ying, Bei-Wen |
author_facet | Xue, Heng Kurokawa, Masaomi Ying, Bei-Wen |
author_sort | Xue, Heng |
collection | PubMed |
description | BACKGROUND: Geographically separated population growth of microbes is a common phenomenon in microbial ecology. Colonies are representative of the morphological characteristics of this structured population growth. Pattern formation by single colonies has been intensively studied, whereas the spatial distribution of colonies is poorly investigated. RESULTS: The present study describes a first trial to address the questions of whether and how the spatial distribution of colonies determines the final colony size using the model microorganism Escherichia coli, colonies of which can be grown under well-controlled laboratory conditions. A computational tool for image processing was developed to evaluate colony density, colony size and size variation, and the Voronoi diagram was applied for spatial analysis of colonies with identical space resources. A positive correlation between the final colony size and the Voronoi area was commonly identified, independent of genomic and nutritional differences, which disturbed the colony size and size variation. CONCLUSIONS: This novel finding of a universal correlation between the spatial distribution and colony size not only indicated the fair distribution of spatial resources for monogenetic colonies growing with identical space resources but also indicated that the initial localization of the microbial colonies decided by chance determined the fate of the subsequent population growth. This study provides a valuable example for quantitative analysis of the complex microbial ecosystems by means of experimental ecology. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12866-021-02180-8. |
format | Online Article Text |
id | pubmed-8051089 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-80510892021-04-19 Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions Xue, Heng Kurokawa, Masaomi Ying, Bei-Wen BMC Microbiol Research Article BACKGROUND: Geographically separated population growth of microbes is a common phenomenon in microbial ecology. Colonies are representative of the morphological characteristics of this structured population growth. Pattern formation by single colonies has been intensively studied, whereas the spatial distribution of colonies is poorly investigated. RESULTS: The present study describes a first trial to address the questions of whether and how the spatial distribution of colonies determines the final colony size using the model microorganism Escherichia coli, colonies of which can be grown under well-controlled laboratory conditions. A computational tool for image processing was developed to evaluate colony density, colony size and size variation, and the Voronoi diagram was applied for spatial analysis of colonies with identical space resources. A positive correlation between the final colony size and the Voronoi area was commonly identified, independent of genomic and nutritional differences, which disturbed the colony size and size variation. CONCLUSIONS: This novel finding of a universal correlation between the spatial distribution and colony size not only indicated the fair distribution of spatial resources for monogenetic colonies growing with identical space resources but also indicated that the initial localization of the microbial colonies decided by chance determined the fate of the subsequent population growth. This study provides a valuable example for quantitative analysis of the complex microbial ecosystems by means of experimental ecology. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12866-021-02180-8. BioMed Central 2021-04-15 /pmc/articles/PMC8051089/ /pubmed/33858359 http://dx.doi.org/10.1186/s12866-021-02180-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Xue, Heng Kurokawa, Masaomi Ying, Bei-Wen Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions |
title | Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions |
title_full | Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions |
title_fullStr | Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions |
title_full_unstemmed | Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions |
title_short | Correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions |
title_sort | correlation between the spatial distribution and colony size was common for monogenetic bacteria in laboratory conditions |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8051089/ https://www.ncbi.nlm.nih.gov/pubmed/33858359 http://dx.doi.org/10.1186/s12866-021-02180-8 |
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