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Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer

Ovarian cancer (OC) is associated with high mortality rate. However, the correlation between immune microenvironment and prognosis of OC remains unclear. This study aimed to explore prognostic significance of OC tumour microenvironment. The OC data set was selected from the cancer genome atlas (TCGA...

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Autores principales: Wang, Xinjing, Li, Xiaoduan, Wang, Xipeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8051724/
https://www.ncbi.nlm.nih.gov/pubmed/33675171
http://dx.doi.org/10.1111/jcmm.16374
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author Wang, Xinjing
Li, Xiaoduan
Wang, Xipeng
author_facet Wang, Xinjing
Li, Xiaoduan
Wang, Xipeng
author_sort Wang, Xinjing
collection PubMed
description Ovarian cancer (OC) is associated with high mortality rate. However, the correlation between immune microenvironment and prognosis of OC remains unclear. This study aimed to explore prognostic significance of OC tumour microenvironment. The OC data set was selected from the cancer genome atlas (TCGA), and 307 samples were collected. Hierarchical clustering was performed according to the expression of 756 genes. The immune and matrix scores of all immune subtypes were determined, and Kruskal‐Wallis test was used to analyse the differences in the immune and matrix scores between OC samples with different immune subtypes. The model for predicting prognosis was constructed based on the expression of immune‐related genes. TIDE platform was applied to predict the effect of immunotherapy on patients with OC of different immune subtypes. The 307 OC samples were classified into three immune subtypes A‐C. Patients in subtype B had poorer prognosis and lower survival rate. The infiltration of helper T cells and macrophages in microenvironment indicated significant differences between immune subtypes. Enrichment analyses of immune cell molecular pathways showed that JAK–STAT3 pathway changed significantly in subtype B. Furthermore, predictive response to immunotherapy in subtype B was significantly higher than that in subtype A and C. Immune subtyping can be used as an independent predictor of the prognosis of OC patients, which may be related to the infiltration patterns of immune cells in tumour microenvironment. In addition, patients in immune subtype B have superior response to immunotherapy, suggesting that patients in subtype B are suitable for immunotherapy.
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spelling pubmed-80517242021-04-21 Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer Wang, Xinjing Li, Xiaoduan Wang, Xipeng J Cell Mol Med Original Articles Ovarian cancer (OC) is associated with high mortality rate. However, the correlation between immune microenvironment and prognosis of OC remains unclear. This study aimed to explore prognostic significance of OC tumour microenvironment. The OC data set was selected from the cancer genome atlas (TCGA), and 307 samples were collected. Hierarchical clustering was performed according to the expression of 756 genes. The immune and matrix scores of all immune subtypes were determined, and Kruskal‐Wallis test was used to analyse the differences in the immune and matrix scores between OC samples with different immune subtypes. The model for predicting prognosis was constructed based on the expression of immune‐related genes. TIDE platform was applied to predict the effect of immunotherapy on patients with OC of different immune subtypes. The 307 OC samples were classified into three immune subtypes A‐C. Patients in subtype B had poorer prognosis and lower survival rate. The infiltration of helper T cells and macrophages in microenvironment indicated significant differences between immune subtypes. Enrichment analyses of immune cell molecular pathways showed that JAK–STAT3 pathway changed significantly in subtype B. Furthermore, predictive response to immunotherapy in subtype B was significantly higher than that in subtype A and C. Immune subtyping can be used as an independent predictor of the prognosis of OC patients, which may be related to the infiltration patterns of immune cells in tumour microenvironment. In addition, patients in immune subtype B have superior response to immunotherapy, suggesting that patients in subtype B are suitable for immunotherapy. John Wiley and Sons Inc. 2021-03-06 2021-04 /pmc/articles/PMC8051724/ /pubmed/33675171 http://dx.doi.org/10.1111/jcmm.16374 Text en © 2021 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Wang, Xinjing
Li, Xiaoduan
Wang, Xipeng
Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer
title Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer
title_full Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer
title_fullStr Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer
title_full_unstemmed Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer
title_short Identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer
title_sort identification of immune microenvironment subtypes that predicted the prognosis of patients with ovarian cancer
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8051724/
https://www.ncbi.nlm.nih.gov/pubmed/33675171
http://dx.doi.org/10.1111/jcmm.16374
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