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Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data
This study aims to construct a robust prognostic model for adult adrenocortical carcinoma (ACC) by large‐scale multiomics analysis and real‐world data. The RPPA data, gene expression profiles and clinical information of adult ACC patients were obtained from The Cancer Proteome Atlas (TCPA), Gene Exp...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8051734/ https://www.ncbi.nlm.nih.gov/pubmed/33626208 http://dx.doi.org/10.1111/jcmm.16323 |
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author | Tian, Xi Xu, Wen‐Hao Anwaier, Aihetaimujiang Wang, Hong‐Kai Wan, Fang‐Ning Cao, Da‐Long Luo, Wen‐Jie Shi, Guo‐Hai Qu, Yuan‐Yuan Zhang, Hai‐Liang Ye, Ding‐Wei |
author_facet | Tian, Xi Xu, Wen‐Hao Anwaier, Aihetaimujiang Wang, Hong‐Kai Wan, Fang‐Ning Cao, Da‐Long Luo, Wen‐Jie Shi, Guo‐Hai Qu, Yuan‐Yuan Zhang, Hai‐Liang Ye, Ding‐Wei |
author_sort | Tian, Xi |
collection | PubMed |
description | This study aims to construct a robust prognostic model for adult adrenocortical carcinoma (ACC) by large‐scale multiomics analysis and real‐world data. The RPPA data, gene expression profiles and clinical information of adult ACC patients were obtained from The Cancer Proteome Atlas (TCPA), Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA). Integrated prognosis‐related proteins (IPRPs) model was constructed. Immunohistochemistry was used to validate the prognostic value of the IPRPs model in Fudan University Shanghai Cancer Center (FUSCC) cohort. 76 ACC cases from TCGA and 22 ACC cases from GSE10927 in NCBI’s GEO database with full data for clinical information and gene expression were utilized to validate the effectiveness of the IPRPs model. Higher FASN (P = .039), FIBRONECTIN (P < .001), TFRC (P < .001), TSC1 (P < .001) expression indicated significantly worse overall survival for adult ACC patients. Risk assessment suggested significantly a strong predictive capacity of IPRPs model for poor overall survival (P < .05). IPRPs model showed a little stronger ability for predicting prognosis than Ki‐67 protein in FUSCC cohort (P = .003, HR = 3.947; P = .005, HR = 3.787). In external validation of IPRPs model using gene expression data, IPRPs model showed strong ability for predicting prognosis in TCGA cohort (P = .005, HR = 3.061) and it exhibited best ability for predicting prognosis in GSE10927 cohort (P = .0898, HR = 2.318). This research constructed IPRPs model for predicting adult ACC patients’ prognosis using proteomic data, gene expression data and real‐world data and this prognostic model showed stronger predictive value than other biomarkers (Ki‐67, Beta‐catenin, etc) in multi‐cohorts. |
format | Online Article Text |
id | pubmed-8051734 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80517342021-04-21 Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data Tian, Xi Xu, Wen‐Hao Anwaier, Aihetaimujiang Wang, Hong‐Kai Wan, Fang‐Ning Cao, Da‐Long Luo, Wen‐Jie Shi, Guo‐Hai Qu, Yuan‐Yuan Zhang, Hai‐Liang Ye, Ding‐Wei J Cell Mol Med Original Articles This study aims to construct a robust prognostic model for adult adrenocortical carcinoma (ACC) by large‐scale multiomics analysis and real‐world data. The RPPA data, gene expression profiles and clinical information of adult ACC patients were obtained from The Cancer Proteome Atlas (TCPA), Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA). Integrated prognosis‐related proteins (IPRPs) model was constructed. Immunohistochemistry was used to validate the prognostic value of the IPRPs model in Fudan University Shanghai Cancer Center (FUSCC) cohort. 76 ACC cases from TCGA and 22 ACC cases from GSE10927 in NCBI’s GEO database with full data for clinical information and gene expression were utilized to validate the effectiveness of the IPRPs model. Higher FASN (P = .039), FIBRONECTIN (P < .001), TFRC (P < .001), TSC1 (P < .001) expression indicated significantly worse overall survival for adult ACC patients. Risk assessment suggested significantly a strong predictive capacity of IPRPs model for poor overall survival (P < .05). IPRPs model showed a little stronger ability for predicting prognosis than Ki‐67 protein in FUSCC cohort (P = .003, HR = 3.947; P = .005, HR = 3.787). In external validation of IPRPs model using gene expression data, IPRPs model showed strong ability for predicting prognosis in TCGA cohort (P = .005, HR = 3.061) and it exhibited best ability for predicting prognosis in GSE10927 cohort (P = .0898, HR = 2.318). This research constructed IPRPs model for predicting adult ACC patients’ prognosis using proteomic data, gene expression data and real‐world data and this prognostic model showed stronger predictive value than other biomarkers (Ki‐67, Beta‐catenin, etc) in multi‐cohorts. John Wiley and Sons Inc. 2021-02-24 2021-04 /pmc/articles/PMC8051734/ /pubmed/33626208 http://dx.doi.org/10.1111/jcmm.16323 Text en © 2021 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Tian, Xi Xu, Wen‐Hao Anwaier, Aihetaimujiang Wang, Hong‐Kai Wan, Fang‐Ning Cao, Da‐Long Luo, Wen‐Jie Shi, Guo‐Hai Qu, Yuan‐Yuan Zhang, Hai‐Liang Ye, Ding‐Wei Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data |
title | Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data |
title_full | Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data |
title_fullStr | Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data |
title_full_unstemmed | Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data |
title_short | Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data |
title_sort | construction of a robust prognostic model for adult adrenocortical carcinoma: results from bioinformatics and real‐world data |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8051734/ https://www.ncbi.nlm.nih.gov/pubmed/33626208 http://dx.doi.org/10.1111/jcmm.16323 |
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