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Efficient automated localization of ECoG electrodes in CT images via shape analysis
PURPOSE: People with drug-refractory epilepsy are potential candidates for surgery. In many cases, epileptogenic zone localization requires intracranial investigations, e.g., via ElectroCorticoGraphy (ECoG), which uses subdural electrodes to map eloquent areas of large cortical regions. Precise elec...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052236/ https://www.ncbi.nlm.nih.gov/pubmed/33687667 http://dx.doi.org/10.1007/s11548-021-02325-0 |
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author | Centracchio, Jessica Sarno, Antonio Esposito, Daniele Andreozzi, Emilio Pavone, Luigi Di Gennaro, Giancarlo Bartolo, Marcello Esposito, Vincenzo Morace, Roberta Casciato, Sara Bifulco, Paolo |
author_facet | Centracchio, Jessica Sarno, Antonio Esposito, Daniele Andreozzi, Emilio Pavone, Luigi Di Gennaro, Giancarlo Bartolo, Marcello Esposito, Vincenzo Morace, Roberta Casciato, Sara Bifulco, Paolo |
author_sort | Centracchio, Jessica |
collection | PubMed |
description | PURPOSE: People with drug-refractory epilepsy are potential candidates for surgery. In many cases, epileptogenic zone localization requires intracranial investigations, e.g., via ElectroCorticoGraphy (ECoG), which uses subdural electrodes to map eloquent areas of large cortical regions. Precise electrodes localization on cortical surface is mandatory to delineate the seizure onset zone. Simple thresholding operations performed on patients’ computed tomography (CT) volumes recognize electrodes but also other metal objects (e.g., wires, stitches), which need to be manually removed. A new automated method based on shape analysis is proposed, which provides substantially improved performances in ECoG electrodes recognition. METHODS: The proposed method was retrospectively tested on 24 CT volumes of subjects with drug-refractory focal epilepsy, presenting a large number (> 1700) of round platinum electrodes. After CT volume thresholding, six geometric features of voxel clusters (volume, symmetry axes lengths, circularity and cylinder similarity) were used to recognize the actual electrodes among all metal objects via a Gaussian support vector machine (G-SVM). The proposed method was further tested on seven CT volumes from a public repository. Simultaneous recognition of depth and ECoG electrodes was also investigated on three additional CT volumes, containing penetrating depth electrodes. RESULTS: The G-SVM provided a 99.74% mean classification accuracy across all 24 single-patient datasets, as well as on the combined dataset. High accuracies were obtained also on the CT volumes from public repository (98.27% across all patients, 99.68% on combined dataset). An overall accuracy of 99.34% was achieved for the recognition of depth and ECoG electrodes. CONCLUSIONS: The proposed method accomplishes automated ECoG electrodes localization with unprecedented accuracy and can be easily implemented into existing software for preoperative analysis process. The preliminary yet surprisingly good results achieved for the simultaneous depth and ECoG electrodes recognition are encouraging. Ethical approval n°NCT04479410 by “IRCCS Neuromed” (Pozzilli, Italy), 30th July 2020. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11548-021-02325-0. |
format | Online Article Text |
id | pubmed-8052236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-80522362021-04-29 Efficient automated localization of ECoG electrodes in CT images via shape analysis Centracchio, Jessica Sarno, Antonio Esposito, Daniele Andreozzi, Emilio Pavone, Luigi Di Gennaro, Giancarlo Bartolo, Marcello Esposito, Vincenzo Morace, Roberta Casciato, Sara Bifulco, Paolo Int J Comput Assist Radiol Surg Original Article PURPOSE: People with drug-refractory epilepsy are potential candidates for surgery. In many cases, epileptogenic zone localization requires intracranial investigations, e.g., via ElectroCorticoGraphy (ECoG), which uses subdural electrodes to map eloquent areas of large cortical regions. Precise electrodes localization on cortical surface is mandatory to delineate the seizure onset zone. Simple thresholding operations performed on patients’ computed tomography (CT) volumes recognize electrodes but also other metal objects (e.g., wires, stitches), which need to be manually removed. A new automated method based on shape analysis is proposed, which provides substantially improved performances in ECoG electrodes recognition. METHODS: The proposed method was retrospectively tested on 24 CT volumes of subjects with drug-refractory focal epilepsy, presenting a large number (> 1700) of round platinum electrodes. After CT volume thresholding, six geometric features of voxel clusters (volume, symmetry axes lengths, circularity and cylinder similarity) were used to recognize the actual electrodes among all metal objects via a Gaussian support vector machine (G-SVM). The proposed method was further tested on seven CT volumes from a public repository. Simultaneous recognition of depth and ECoG electrodes was also investigated on three additional CT volumes, containing penetrating depth electrodes. RESULTS: The G-SVM provided a 99.74% mean classification accuracy across all 24 single-patient datasets, as well as on the combined dataset. High accuracies were obtained also on the CT volumes from public repository (98.27% across all patients, 99.68% on combined dataset). An overall accuracy of 99.34% was achieved for the recognition of depth and ECoG electrodes. CONCLUSIONS: The proposed method accomplishes automated ECoG electrodes localization with unprecedented accuracy and can be easily implemented into existing software for preoperative analysis process. The preliminary yet surprisingly good results achieved for the simultaneous depth and ECoG electrodes recognition are encouraging. Ethical approval n°NCT04479410 by “IRCCS Neuromed” (Pozzilli, Italy), 30th July 2020. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11548-021-02325-0. Springer International Publishing 2021-03-09 2021 /pmc/articles/PMC8052236/ /pubmed/33687667 http://dx.doi.org/10.1007/s11548-021-02325-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Centracchio, Jessica Sarno, Antonio Esposito, Daniele Andreozzi, Emilio Pavone, Luigi Di Gennaro, Giancarlo Bartolo, Marcello Esposito, Vincenzo Morace, Roberta Casciato, Sara Bifulco, Paolo Efficient automated localization of ECoG electrodes in CT images via shape analysis |
title | Efficient automated localization of ECoG electrodes in CT images via shape analysis |
title_full | Efficient automated localization of ECoG electrodes in CT images via shape analysis |
title_fullStr | Efficient automated localization of ECoG electrodes in CT images via shape analysis |
title_full_unstemmed | Efficient automated localization of ECoG electrodes in CT images via shape analysis |
title_short | Efficient automated localization of ECoG electrodes in CT images via shape analysis |
title_sort | efficient automated localization of ecog electrodes in ct images via shape analysis |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052236/ https://www.ncbi.nlm.nih.gov/pubmed/33687667 http://dx.doi.org/10.1007/s11548-021-02325-0 |
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