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Optimisation of the coalescent hyperbolic embedding of complex networks
Several observations indicate the existence of a latent hyperbolic space behind real networks that makes their structure very intuitive in the sense that the probability for a connection is decreasing with the hyperbolic distance between the nodes. A remarkable network model generating random graphs...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052422/ https://www.ncbi.nlm.nih.gov/pubmed/33863973 http://dx.doi.org/10.1038/s41598-021-87333-5 |
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author | Kovács, Bianka Palla, Gergely |
author_facet | Kovács, Bianka Palla, Gergely |
author_sort | Kovács, Bianka |
collection | PubMed |
description | Several observations indicate the existence of a latent hyperbolic space behind real networks that makes their structure very intuitive in the sense that the probability for a connection is decreasing with the hyperbolic distance between the nodes. A remarkable network model generating random graphs along this line is the popularity-similarity optimisation (PSO) model, offering a scale-free degree distribution, high clustering and the small-world property at the same time. These results provide a strong motivation for the development of hyperbolic embedding algorithms, that tackle the problem of finding the optimal hyperbolic coordinates of the nodes based on the network structure. A very promising recent approach for hyperbolic embedding is provided by the noncentered minimum curvilinear embedding (ncMCE) method, belonging to the family of coalescent embedding algorithms. This approach offers a high-quality embedding at a low running time. In the present work we propose a further optimisation of the angular coordinates in this framework that seems to reduce the logarithmic loss and increase the greedy routing score of the embedding compared to the original version, thereby adding an extra improvement to the quality of the inferred hyperbolic coordinates. |
format | Online Article Text |
id | pubmed-8052422 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80524222021-04-22 Optimisation of the coalescent hyperbolic embedding of complex networks Kovács, Bianka Palla, Gergely Sci Rep Article Several observations indicate the existence of a latent hyperbolic space behind real networks that makes their structure very intuitive in the sense that the probability for a connection is decreasing with the hyperbolic distance between the nodes. A remarkable network model generating random graphs along this line is the popularity-similarity optimisation (PSO) model, offering a scale-free degree distribution, high clustering and the small-world property at the same time. These results provide a strong motivation for the development of hyperbolic embedding algorithms, that tackle the problem of finding the optimal hyperbolic coordinates of the nodes based on the network structure. A very promising recent approach for hyperbolic embedding is provided by the noncentered minimum curvilinear embedding (ncMCE) method, belonging to the family of coalescent embedding algorithms. This approach offers a high-quality embedding at a low running time. In the present work we propose a further optimisation of the angular coordinates in this framework that seems to reduce the logarithmic loss and increase the greedy routing score of the embedding compared to the original version, thereby adding an extra improvement to the quality of the inferred hyperbolic coordinates. Nature Publishing Group UK 2021-04-16 /pmc/articles/PMC8052422/ /pubmed/33863973 http://dx.doi.org/10.1038/s41598-021-87333-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kovács, Bianka Palla, Gergely Optimisation of the coalescent hyperbolic embedding of complex networks |
title | Optimisation of the coalescent hyperbolic embedding of complex networks |
title_full | Optimisation of the coalescent hyperbolic embedding of complex networks |
title_fullStr | Optimisation of the coalescent hyperbolic embedding of complex networks |
title_full_unstemmed | Optimisation of the coalescent hyperbolic embedding of complex networks |
title_short | Optimisation of the coalescent hyperbolic embedding of complex networks |
title_sort | optimisation of the coalescent hyperbolic embedding of complex networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052422/ https://www.ncbi.nlm.nih.gov/pubmed/33863973 http://dx.doi.org/10.1038/s41598-021-87333-5 |
work_keys_str_mv | AT kovacsbianka optimisationofthecoalescenthyperbolicembeddingofcomplexnetworks AT pallagergely optimisationofthecoalescenthyperbolicembeddingofcomplexnetworks |