Cargando…

Optimisation of the coalescent hyperbolic embedding of complex networks

Several observations indicate the existence of a latent hyperbolic space behind real networks that makes their structure very intuitive in the sense that the probability for a connection is decreasing with the hyperbolic distance between the nodes. A remarkable network model generating random graphs...

Descripción completa

Detalles Bibliográficos
Autores principales: Kovács, Bianka, Palla, Gergely
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052422/
https://www.ncbi.nlm.nih.gov/pubmed/33863973
http://dx.doi.org/10.1038/s41598-021-87333-5
_version_ 1783679915114102784
author Kovács, Bianka
Palla, Gergely
author_facet Kovács, Bianka
Palla, Gergely
author_sort Kovács, Bianka
collection PubMed
description Several observations indicate the existence of a latent hyperbolic space behind real networks that makes their structure very intuitive in the sense that the probability for a connection is decreasing with the hyperbolic distance between the nodes. A remarkable network model generating random graphs along this line is the popularity-similarity optimisation (PSO) model, offering a scale-free degree distribution, high clustering and the small-world property at the same time. These results provide a strong motivation for the development of hyperbolic embedding algorithms, that tackle the problem of finding the optimal hyperbolic coordinates of the nodes based on the network structure. A very promising recent approach for hyperbolic embedding is provided by the noncentered minimum curvilinear embedding (ncMCE) method, belonging to the family of coalescent embedding algorithms. This approach offers a high-quality embedding at a low running time. In the present work we propose a further optimisation of the angular coordinates in this framework that seems to reduce the logarithmic loss and increase the greedy routing score of the embedding compared to the original version, thereby adding an extra improvement to the quality of the inferred hyperbolic coordinates.
format Online
Article
Text
id pubmed-8052422
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-80524222021-04-22 Optimisation of the coalescent hyperbolic embedding of complex networks Kovács, Bianka Palla, Gergely Sci Rep Article Several observations indicate the existence of a latent hyperbolic space behind real networks that makes their structure very intuitive in the sense that the probability for a connection is decreasing with the hyperbolic distance between the nodes. A remarkable network model generating random graphs along this line is the popularity-similarity optimisation (PSO) model, offering a scale-free degree distribution, high clustering and the small-world property at the same time. These results provide a strong motivation for the development of hyperbolic embedding algorithms, that tackle the problem of finding the optimal hyperbolic coordinates of the nodes based on the network structure. A very promising recent approach for hyperbolic embedding is provided by the noncentered minimum curvilinear embedding (ncMCE) method, belonging to the family of coalescent embedding algorithms. This approach offers a high-quality embedding at a low running time. In the present work we propose a further optimisation of the angular coordinates in this framework that seems to reduce the logarithmic loss and increase the greedy routing score of the embedding compared to the original version, thereby adding an extra improvement to the quality of the inferred hyperbolic coordinates. Nature Publishing Group UK 2021-04-16 /pmc/articles/PMC8052422/ /pubmed/33863973 http://dx.doi.org/10.1038/s41598-021-87333-5 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kovács, Bianka
Palla, Gergely
Optimisation of the coalescent hyperbolic embedding of complex networks
title Optimisation of the coalescent hyperbolic embedding of complex networks
title_full Optimisation of the coalescent hyperbolic embedding of complex networks
title_fullStr Optimisation of the coalescent hyperbolic embedding of complex networks
title_full_unstemmed Optimisation of the coalescent hyperbolic embedding of complex networks
title_short Optimisation of the coalescent hyperbolic embedding of complex networks
title_sort optimisation of the coalescent hyperbolic embedding of complex networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052422/
https://www.ncbi.nlm.nih.gov/pubmed/33863973
http://dx.doi.org/10.1038/s41598-021-87333-5
work_keys_str_mv AT kovacsbianka optimisationofthecoalescenthyperbolicembeddingofcomplexnetworks
AT pallagergely optimisationofthecoalescenthyperbolicembeddingofcomplexnetworks