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Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department
BACKGROUND: Chest pain is among the most common presenting complaints in the emergency department (ED). Swift and accurate risk stratification of chest pain patients in the ED may improve patient outcomes and reduce unnecessary costs. Traditional logistic regression with stepwise variable selection...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052947/ https://www.ncbi.nlm.nih.gov/pubmed/33865317 http://dx.doi.org/10.1186/s12874-021-01265-2 |
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author | Liu, Nan Chee, Marcel Lucas Koh, Zhi Xiong Leow, Su Li Ho, Andrew Fu Wah Guo, Dagang Ong, Marcus Eng Hock |
author_facet | Liu, Nan Chee, Marcel Lucas Koh, Zhi Xiong Leow, Su Li Ho, Andrew Fu Wah Guo, Dagang Ong, Marcus Eng Hock |
author_sort | Liu, Nan |
collection | PubMed |
description | BACKGROUND: Chest pain is among the most common presenting complaints in the emergency department (ED). Swift and accurate risk stratification of chest pain patients in the ED may improve patient outcomes and reduce unnecessary costs. Traditional logistic regression with stepwise variable selection has been used to build risk prediction models for ED chest pain patients. In this study, we aimed to investigate if machine learning dimensionality reduction methods can improve performance in deriving risk stratification models. METHODS: A retrospective analysis was conducted on the data of patients > 20 years old who presented to the ED of Singapore General Hospital with chest pain between September 2010 and July 2015. Variables used included demographics, medical history, laboratory findings, heart rate variability (HRV), and heart rate n-variability (HRnV) parameters calculated from five to six-minute electrocardiograms (ECGs). The primary outcome was 30-day major adverse cardiac events (MACE), which included death, acute myocardial infarction, and revascularization within 30 days of ED presentation. We used eight machine learning dimensionality reduction methods and logistic regression to create different prediction models. We further excluded cardiac troponin from candidate variables and derived a separate set of models to evaluate the performance of models without using laboratory tests. Receiver operating characteristic (ROC) and calibration analysis was used to compare model performance. RESULTS: Seven hundred ninety-five patients were included in the analysis, of which 247 (31%) met the primary outcome of 30-day MACE. Patients with MACE were older and more likely to be male. All eight dimensionality reduction methods achieved comparable performance with the traditional stepwise variable selection; The multidimensional scaling algorithm performed the best with an area under the curve of 0.901. All prediction models generated in this study outperformed several existing clinical scores in ROC analysis. CONCLUSIONS: Dimensionality reduction models showed marginal value in improving the prediction of 30-day MACE for ED chest pain patients. Moreover, they are black box models, making them difficult to explain and interpret in clinical practice. |
format | Online Article Text |
id | pubmed-8052947 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-80529472021-04-19 Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department Liu, Nan Chee, Marcel Lucas Koh, Zhi Xiong Leow, Su Li Ho, Andrew Fu Wah Guo, Dagang Ong, Marcus Eng Hock BMC Med Res Methodol Research Article BACKGROUND: Chest pain is among the most common presenting complaints in the emergency department (ED). Swift and accurate risk stratification of chest pain patients in the ED may improve patient outcomes and reduce unnecessary costs. Traditional logistic regression with stepwise variable selection has been used to build risk prediction models for ED chest pain patients. In this study, we aimed to investigate if machine learning dimensionality reduction methods can improve performance in deriving risk stratification models. METHODS: A retrospective analysis was conducted on the data of patients > 20 years old who presented to the ED of Singapore General Hospital with chest pain between September 2010 and July 2015. Variables used included demographics, medical history, laboratory findings, heart rate variability (HRV), and heart rate n-variability (HRnV) parameters calculated from five to six-minute electrocardiograms (ECGs). The primary outcome was 30-day major adverse cardiac events (MACE), which included death, acute myocardial infarction, and revascularization within 30 days of ED presentation. We used eight machine learning dimensionality reduction methods and logistic regression to create different prediction models. We further excluded cardiac troponin from candidate variables and derived a separate set of models to evaluate the performance of models without using laboratory tests. Receiver operating characteristic (ROC) and calibration analysis was used to compare model performance. RESULTS: Seven hundred ninety-five patients were included in the analysis, of which 247 (31%) met the primary outcome of 30-day MACE. Patients with MACE were older and more likely to be male. All eight dimensionality reduction methods achieved comparable performance with the traditional stepwise variable selection; The multidimensional scaling algorithm performed the best with an area under the curve of 0.901. All prediction models generated in this study outperformed several existing clinical scores in ROC analysis. CONCLUSIONS: Dimensionality reduction models showed marginal value in improving the prediction of 30-day MACE for ED chest pain patients. Moreover, they are black box models, making them difficult to explain and interpret in clinical practice. BioMed Central 2021-04-17 /pmc/articles/PMC8052947/ /pubmed/33865317 http://dx.doi.org/10.1186/s12874-021-01265-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Liu, Nan Chee, Marcel Lucas Koh, Zhi Xiong Leow, Su Li Ho, Andrew Fu Wah Guo, Dagang Ong, Marcus Eng Hock Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department |
title | Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department |
title_full | Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department |
title_fullStr | Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department |
title_full_unstemmed | Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department |
title_short | Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department |
title_sort | utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8052947/ https://www.ncbi.nlm.nih.gov/pubmed/33865317 http://dx.doi.org/10.1186/s12874-021-01265-2 |
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