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Day-to-day discovery of preprint–publication links
Preprints promote the open and fast communication of non-peer reviewed work. Once a preprint is published in a peer-reviewed venue, the preprint server updates its web page: a prominent hyperlink leading to the newly published work is added. Linking preprints to publications is of utmost importance...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8053368/ https://www.ncbi.nlm.nih.gov/pubmed/33897069 http://dx.doi.org/10.1007/s11192-021-03900-7 |
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author | Cabanac, Guillaume Oikonomidi, Theodora Boutron, Isabelle |
author_facet | Cabanac, Guillaume Oikonomidi, Theodora Boutron, Isabelle |
author_sort | Cabanac, Guillaume |
collection | PubMed |
description | Preprints promote the open and fast communication of non-peer reviewed work. Once a preprint is published in a peer-reviewed venue, the preprint server updates its web page: a prominent hyperlink leading to the newly published work is added. Linking preprints to publications is of utmost importance as it provides readers with the latest version of a now certified work. Yet leading preprint servers fail to identify all existing preprint–publication links. This limitation calls for a more thorough approach to this critical information retrieval task: overlooking published evidence translates into partial and even inaccurate systematic reviews on health-related issues, for instance. We designed an algorithm leveraging the Crossref public and free source of bibliographic metadata to comb the literature for preprint–publication links. We tested it on a reference preprint set identified and curated for a living systematic review on interventions for preventing and treating COVID-19 performed by international collaboration: the COVID-NMA initiative (covid-nma.com). The reference set comprised 343 preprints, 121 of which appeared as a publication in a peer-reviewed journal. While the preprint servers identified 39.7% of the preprint–publication links, our linker identified 90.9% of the expected links with no clues taken from the preprint servers. The accuracy of the proposed linker is 91.5% on this reference set, with 90.9% sensitivity and 91.9% specificity. This is a 16.26% increase in accuracy compared to that of preprint servers. We release this software as supplementary material to foster its integration into preprint servers’ workflows and enhance a daily preprint–publication chase that is useful to all readers, including systematic reviewers. This preprint–publication linker currently provides day-to-day updates to the biomedical experts of the COVID-NMA initiative. |
format | Online Article Text |
id | pubmed-8053368 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-80533682021-04-19 Day-to-day discovery of preprint–publication links Cabanac, Guillaume Oikonomidi, Theodora Boutron, Isabelle Scientometrics Article Preprints promote the open and fast communication of non-peer reviewed work. Once a preprint is published in a peer-reviewed venue, the preprint server updates its web page: a prominent hyperlink leading to the newly published work is added. Linking preprints to publications is of utmost importance as it provides readers with the latest version of a now certified work. Yet leading preprint servers fail to identify all existing preprint–publication links. This limitation calls for a more thorough approach to this critical information retrieval task: overlooking published evidence translates into partial and even inaccurate systematic reviews on health-related issues, for instance. We designed an algorithm leveraging the Crossref public and free source of bibliographic metadata to comb the literature for preprint–publication links. We tested it on a reference preprint set identified and curated for a living systematic review on interventions for preventing and treating COVID-19 performed by international collaboration: the COVID-NMA initiative (covid-nma.com). The reference set comprised 343 preprints, 121 of which appeared as a publication in a peer-reviewed journal. While the preprint servers identified 39.7% of the preprint–publication links, our linker identified 90.9% of the expected links with no clues taken from the preprint servers. The accuracy of the proposed linker is 91.5% on this reference set, with 90.9% sensitivity and 91.9% specificity. This is a 16.26% increase in accuracy compared to that of preprint servers. We release this software as supplementary material to foster its integration into preprint servers’ workflows and enhance a daily preprint–publication chase that is useful to all readers, including systematic reviewers. This preprint–publication linker currently provides day-to-day updates to the biomedical experts of the COVID-NMA initiative. Springer International Publishing 2021-04-18 2021 /pmc/articles/PMC8053368/ /pubmed/33897069 http://dx.doi.org/10.1007/s11192-021-03900-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Cabanac, Guillaume Oikonomidi, Theodora Boutron, Isabelle Day-to-day discovery of preprint–publication links |
title | Day-to-day discovery of preprint–publication links |
title_full | Day-to-day discovery of preprint–publication links |
title_fullStr | Day-to-day discovery of preprint–publication links |
title_full_unstemmed | Day-to-day discovery of preprint–publication links |
title_short | Day-to-day discovery of preprint–publication links |
title_sort | day-to-day discovery of preprint–publication links |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8053368/ https://www.ncbi.nlm.nih.gov/pubmed/33897069 http://dx.doi.org/10.1007/s11192-021-03900-7 |
work_keys_str_mv | AT cabanacguillaume daytodaydiscoveryofpreprintpublicationlinks AT oikonomiditheodora daytodaydiscoveryofpreprintpublicationlinks AT boutronisabelle daytodaydiscoveryofpreprintpublicationlinks |