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Skin Lesion Classification Using Additional Patient Information
In this paper, we describe our method for skin lesion classification. The goal is to classify skin lesions based on dermoscopic images to several diagnoses' classes presented in the HAM (Human Against Machine) dataset: melanoma (MEL), melanocytic nevus (NV), basal cell carcinoma (BCC), actinic...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8055397/ https://www.ncbi.nlm.nih.gov/pubmed/33937410 http://dx.doi.org/10.1155/2021/6673852 |
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author | Sun, Qilin Huang, Chao Chen, Minjie Xu, Hui Yang, Yali |
author_facet | Sun, Qilin Huang, Chao Chen, Minjie Xu, Hui Yang, Yali |
author_sort | Sun, Qilin |
collection | PubMed |
description | In this paper, we describe our method for skin lesion classification. The goal is to classify skin lesions based on dermoscopic images to several diagnoses' classes presented in the HAM (Human Against Machine) dataset: melanoma (MEL), melanocytic nevus (NV), basal cell carcinoma (BCC), actinic keratosis (AK), benign keratosis (BKL), dermatofibroma (DF), and vascular lesion (VASC). We propose a simplified solution which has a better accuracy than previous methods, but only predicted on a single model that is practical for a real-world scenario. Our results show that using a network with additional metadata as input achieves a better classification performance. This metadata includes both the patient information and the extra information during the data augmentation process. On the international skin imaging collaboration (ISIC) 2018 skin lesion classification challenge test set, our algorithm yields a balanced multiclass accuracy of 88.7% on a single model and 89.5% for the embedding solution, which makes it the currently first ranked algorithm on the live leaderboard. To improve the inference accuracy. Test time augmentation (TTA) is applied. We also demonstrate how Grad-CAM is applied in TTA. Therefore, TTA and Grad-CAM can be integrated in heat map generation, which can be very helpful to assist the clinician for diagnosis. |
format | Online Article Text |
id | pubmed-8055397 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-80553972021-04-29 Skin Lesion Classification Using Additional Patient Information Sun, Qilin Huang, Chao Chen, Minjie Xu, Hui Yang, Yali Biomed Res Int Research Article In this paper, we describe our method for skin lesion classification. The goal is to classify skin lesions based on dermoscopic images to several diagnoses' classes presented in the HAM (Human Against Machine) dataset: melanoma (MEL), melanocytic nevus (NV), basal cell carcinoma (BCC), actinic keratosis (AK), benign keratosis (BKL), dermatofibroma (DF), and vascular lesion (VASC). We propose a simplified solution which has a better accuracy than previous methods, but only predicted on a single model that is practical for a real-world scenario. Our results show that using a network with additional metadata as input achieves a better classification performance. This metadata includes both the patient information and the extra information during the data augmentation process. On the international skin imaging collaboration (ISIC) 2018 skin lesion classification challenge test set, our algorithm yields a balanced multiclass accuracy of 88.7% on a single model and 89.5% for the embedding solution, which makes it the currently first ranked algorithm on the live leaderboard. To improve the inference accuracy. Test time augmentation (TTA) is applied. We also demonstrate how Grad-CAM is applied in TTA. Therefore, TTA and Grad-CAM can be integrated in heat map generation, which can be very helpful to assist the clinician for diagnosis. Hindawi 2021-04-10 /pmc/articles/PMC8055397/ /pubmed/33937410 http://dx.doi.org/10.1155/2021/6673852 Text en Copyright © 2021 Qilin Sun et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Sun, Qilin Huang, Chao Chen, Minjie Xu, Hui Yang, Yali Skin Lesion Classification Using Additional Patient Information |
title | Skin Lesion Classification Using Additional Patient Information |
title_full | Skin Lesion Classification Using Additional Patient Information |
title_fullStr | Skin Lesion Classification Using Additional Patient Information |
title_full_unstemmed | Skin Lesion Classification Using Additional Patient Information |
title_short | Skin Lesion Classification Using Additional Patient Information |
title_sort | skin lesion classification using additional patient information |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8055397/ https://www.ncbi.nlm.nih.gov/pubmed/33937410 http://dx.doi.org/10.1155/2021/6673852 |
work_keys_str_mv | AT sunqilin skinlesionclassificationusingadditionalpatientinformation AT huangchao skinlesionclassificationusingadditionalpatientinformation AT chenminjie skinlesionclassificationusingadditionalpatientinformation AT xuhui skinlesionclassificationusingadditionalpatientinformation AT yangyali skinlesionclassificationusingadditionalpatientinformation |