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Skin Lesion Classification Using Additional Patient Information

In this paper, we describe our method for skin lesion classification. The goal is to classify skin lesions based on dermoscopic images to several diagnoses' classes presented in the HAM (Human Against Machine) dataset: melanoma (MEL), melanocytic nevus (NV), basal cell carcinoma (BCC), actinic...

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Detalles Bibliográficos
Autores principales: Sun, Qilin, Huang, Chao, Chen, Minjie, Xu, Hui, Yang, Yali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8055397/
https://www.ncbi.nlm.nih.gov/pubmed/33937410
http://dx.doi.org/10.1155/2021/6673852
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author Sun, Qilin
Huang, Chao
Chen, Minjie
Xu, Hui
Yang, Yali
author_facet Sun, Qilin
Huang, Chao
Chen, Minjie
Xu, Hui
Yang, Yali
author_sort Sun, Qilin
collection PubMed
description In this paper, we describe our method for skin lesion classification. The goal is to classify skin lesions based on dermoscopic images to several diagnoses' classes presented in the HAM (Human Against Machine) dataset: melanoma (MEL), melanocytic nevus (NV), basal cell carcinoma (BCC), actinic keratosis (AK), benign keratosis (BKL), dermatofibroma (DF), and vascular lesion (VASC). We propose a simplified solution which has a better accuracy than previous methods, but only predicted on a single model that is practical for a real-world scenario. Our results show that using a network with additional metadata as input achieves a better classification performance. This metadata includes both the patient information and the extra information during the data augmentation process. On the international skin imaging collaboration (ISIC) 2018 skin lesion classification challenge test set, our algorithm yields a balanced multiclass accuracy of 88.7% on a single model and 89.5% for the embedding solution, which makes it the currently first ranked algorithm on the live leaderboard. To improve the inference accuracy. Test time augmentation (TTA) is applied. We also demonstrate how Grad-CAM is applied in TTA. Therefore, TTA and Grad-CAM can be integrated in heat map generation, which can be very helpful to assist the clinician for diagnosis.
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spelling pubmed-80553972021-04-29 Skin Lesion Classification Using Additional Patient Information Sun, Qilin Huang, Chao Chen, Minjie Xu, Hui Yang, Yali Biomed Res Int Research Article In this paper, we describe our method for skin lesion classification. The goal is to classify skin lesions based on dermoscopic images to several diagnoses' classes presented in the HAM (Human Against Machine) dataset: melanoma (MEL), melanocytic nevus (NV), basal cell carcinoma (BCC), actinic keratosis (AK), benign keratosis (BKL), dermatofibroma (DF), and vascular lesion (VASC). We propose a simplified solution which has a better accuracy than previous methods, but only predicted on a single model that is practical for a real-world scenario. Our results show that using a network with additional metadata as input achieves a better classification performance. This metadata includes both the patient information and the extra information during the data augmentation process. On the international skin imaging collaboration (ISIC) 2018 skin lesion classification challenge test set, our algorithm yields a balanced multiclass accuracy of 88.7% on a single model and 89.5% for the embedding solution, which makes it the currently first ranked algorithm on the live leaderboard. To improve the inference accuracy. Test time augmentation (TTA) is applied. We also demonstrate how Grad-CAM is applied in TTA. Therefore, TTA and Grad-CAM can be integrated in heat map generation, which can be very helpful to assist the clinician for diagnosis. Hindawi 2021-04-10 /pmc/articles/PMC8055397/ /pubmed/33937410 http://dx.doi.org/10.1155/2021/6673852 Text en Copyright © 2021 Qilin Sun et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Sun, Qilin
Huang, Chao
Chen, Minjie
Xu, Hui
Yang, Yali
Skin Lesion Classification Using Additional Patient Information
title Skin Lesion Classification Using Additional Patient Information
title_full Skin Lesion Classification Using Additional Patient Information
title_fullStr Skin Lesion Classification Using Additional Patient Information
title_full_unstemmed Skin Lesion Classification Using Additional Patient Information
title_short Skin Lesion Classification Using Additional Patient Information
title_sort skin lesion classification using additional patient information
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8055397/
https://www.ncbi.nlm.nih.gov/pubmed/33937410
http://dx.doi.org/10.1155/2021/6673852
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