Cargando…

Deep image prior for undersampling high-speed photoacoustic microscopy

Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser’s repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view....

Descripción completa

Detalles Bibliográficos
Autores principales: Vu, Tri, DiSpirito, Anthony, Li, Daiwei, Wang, Zixuan, Zhu, Xiaoyi, Chen, Maomao, Jiang, Laiming, Zhang, Dong, Luo, Jianwen, Zhang, Yu Shrike, Zhou, Qifa, Horstmeyer, Roarke, Yao, Junjie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056431/
https://www.ncbi.nlm.nih.gov/pubmed/33898247
http://dx.doi.org/10.1016/j.pacs.2021.100266
_version_ 1783680646676217856
author Vu, Tri
DiSpirito, Anthony
Li, Daiwei
Wang, Zixuan
Zhu, Xiaoyi
Chen, Maomao
Jiang, Laiming
Zhang, Dong
Luo, Jianwen
Zhang, Yu Shrike
Zhou, Qifa
Horstmeyer, Roarke
Yao, Junjie
author_facet Vu, Tri
DiSpirito, Anthony
Li, Daiwei
Wang, Zixuan
Zhu, Xiaoyi
Chen, Maomao
Jiang, Laiming
Zhang, Dong
Luo, Jianwen
Zhang, Yu Shrike
Zhou, Qifa
Horstmeyer, Roarke
Yao, Junjie
author_sort Vu, Tri
collection PubMed
description Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser’s repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view. Deep learning (DL) methods have recently been used to improve sparsely sampled PAM images; however, these methods often require time-consuming pre-training and large training dataset with ground truth. Here, we propose the use of deep image prior (DIP) to improve the image quality of undersampled PAM images. Unlike other DL approaches, DIP requires neither pre-training nor fully-sampled ground truth, enabling its flexible and fast implementation on various imaging targets. Our results have demonstrated substantial improvement in PAM images with as few as 1.4 % of the fully sampled pixels on high-speed PAM. Our approach outperforms interpolation, is competitive with pre-trained supervised DL method, and is readily translated to other high-speed, undersampling imaging modalities.
format Online
Article
Text
id pubmed-8056431
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-80564312021-04-23 Deep image prior for undersampling high-speed photoacoustic microscopy Vu, Tri DiSpirito, Anthony Li, Daiwei Wang, Zixuan Zhu, Xiaoyi Chen, Maomao Jiang, Laiming Zhang, Dong Luo, Jianwen Zhang, Yu Shrike Zhou, Qifa Horstmeyer, Roarke Yao, Junjie Photoacoustics Research Article Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser’s repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view. Deep learning (DL) methods have recently been used to improve sparsely sampled PAM images; however, these methods often require time-consuming pre-training and large training dataset with ground truth. Here, we propose the use of deep image prior (DIP) to improve the image quality of undersampled PAM images. Unlike other DL approaches, DIP requires neither pre-training nor fully-sampled ground truth, enabling its flexible and fast implementation on various imaging targets. Our results have demonstrated substantial improvement in PAM images with as few as 1.4 % of the fully sampled pixels on high-speed PAM. Our approach outperforms interpolation, is competitive with pre-trained supervised DL method, and is readily translated to other high-speed, undersampling imaging modalities. Elsevier 2021-03-31 /pmc/articles/PMC8056431/ /pubmed/33898247 http://dx.doi.org/10.1016/j.pacs.2021.100266 Text en © 2021 Published by Elsevier GmbH. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Vu, Tri
DiSpirito, Anthony
Li, Daiwei
Wang, Zixuan
Zhu, Xiaoyi
Chen, Maomao
Jiang, Laiming
Zhang, Dong
Luo, Jianwen
Zhang, Yu Shrike
Zhou, Qifa
Horstmeyer, Roarke
Yao, Junjie
Deep image prior for undersampling high-speed photoacoustic microscopy
title Deep image prior for undersampling high-speed photoacoustic microscopy
title_full Deep image prior for undersampling high-speed photoacoustic microscopy
title_fullStr Deep image prior for undersampling high-speed photoacoustic microscopy
title_full_unstemmed Deep image prior for undersampling high-speed photoacoustic microscopy
title_short Deep image prior for undersampling high-speed photoacoustic microscopy
title_sort deep image prior for undersampling high-speed photoacoustic microscopy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056431/
https://www.ncbi.nlm.nih.gov/pubmed/33898247
http://dx.doi.org/10.1016/j.pacs.2021.100266
work_keys_str_mv AT vutri deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT dispiritoanthony deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT lidaiwei deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT wangzixuan deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT zhuxiaoyi deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT chenmaomao deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT jianglaiming deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT zhangdong deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT luojianwen deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT zhangyushrike deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT zhouqifa deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT horstmeyerroarke deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy
AT yaojunjie deepimagepriorforundersamplinghighspeedphotoacousticmicroscopy