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Deep image prior for undersampling high-speed photoacoustic microscopy
Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser’s repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view....
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056431/ https://www.ncbi.nlm.nih.gov/pubmed/33898247 http://dx.doi.org/10.1016/j.pacs.2021.100266 |
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author | Vu, Tri DiSpirito, Anthony Li, Daiwei Wang, Zixuan Zhu, Xiaoyi Chen, Maomao Jiang, Laiming Zhang, Dong Luo, Jianwen Zhang, Yu Shrike Zhou, Qifa Horstmeyer, Roarke Yao, Junjie |
author_facet | Vu, Tri DiSpirito, Anthony Li, Daiwei Wang, Zixuan Zhu, Xiaoyi Chen, Maomao Jiang, Laiming Zhang, Dong Luo, Jianwen Zhang, Yu Shrike Zhou, Qifa Horstmeyer, Roarke Yao, Junjie |
author_sort | Vu, Tri |
collection | PubMed |
description | Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser’s repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view. Deep learning (DL) methods have recently been used to improve sparsely sampled PAM images; however, these methods often require time-consuming pre-training and large training dataset with ground truth. Here, we propose the use of deep image prior (DIP) to improve the image quality of undersampled PAM images. Unlike other DL approaches, DIP requires neither pre-training nor fully-sampled ground truth, enabling its flexible and fast implementation on various imaging targets. Our results have demonstrated substantial improvement in PAM images with as few as 1.4 % of the fully sampled pixels on high-speed PAM. Our approach outperforms interpolation, is competitive with pre-trained supervised DL method, and is readily translated to other high-speed, undersampling imaging modalities. |
format | Online Article Text |
id | pubmed-8056431 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-80564312021-04-23 Deep image prior for undersampling high-speed photoacoustic microscopy Vu, Tri DiSpirito, Anthony Li, Daiwei Wang, Zixuan Zhu, Xiaoyi Chen, Maomao Jiang, Laiming Zhang, Dong Luo, Jianwen Zhang, Yu Shrike Zhou, Qifa Horstmeyer, Roarke Yao, Junjie Photoacoustics Research Article Photoacoustic microscopy (PAM) is an emerging imaging method combining light and sound. However, limited by the laser’s repetition rate, state-of-the-art high-speed PAM technology often sacrifices spatial sampling density (i.e., undersampling) for increased imaging speed over a large field-of-view. Deep learning (DL) methods have recently been used to improve sparsely sampled PAM images; however, these methods often require time-consuming pre-training and large training dataset with ground truth. Here, we propose the use of deep image prior (DIP) to improve the image quality of undersampled PAM images. Unlike other DL approaches, DIP requires neither pre-training nor fully-sampled ground truth, enabling its flexible and fast implementation on various imaging targets. Our results have demonstrated substantial improvement in PAM images with as few as 1.4 % of the fully sampled pixels on high-speed PAM. Our approach outperforms interpolation, is competitive with pre-trained supervised DL method, and is readily translated to other high-speed, undersampling imaging modalities. Elsevier 2021-03-31 /pmc/articles/PMC8056431/ /pubmed/33898247 http://dx.doi.org/10.1016/j.pacs.2021.100266 Text en © 2021 Published by Elsevier GmbH. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Vu, Tri DiSpirito, Anthony Li, Daiwei Wang, Zixuan Zhu, Xiaoyi Chen, Maomao Jiang, Laiming Zhang, Dong Luo, Jianwen Zhang, Yu Shrike Zhou, Qifa Horstmeyer, Roarke Yao, Junjie Deep image prior for undersampling high-speed photoacoustic microscopy |
title | Deep image prior for undersampling high-speed photoacoustic microscopy |
title_full | Deep image prior for undersampling high-speed photoacoustic microscopy |
title_fullStr | Deep image prior for undersampling high-speed photoacoustic microscopy |
title_full_unstemmed | Deep image prior for undersampling high-speed photoacoustic microscopy |
title_short | Deep image prior for undersampling high-speed photoacoustic microscopy |
title_sort | deep image prior for undersampling high-speed photoacoustic microscopy |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056431/ https://www.ncbi.nlm.nih.gov/pubmed/33898247 http://dx.doi.org/10.1016/j.pacs.2021.100266 |
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