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Zea mays RNA-seq estimated transcript abundances are strongly affected by read mapping bias

BACKGROUND: Genetic variation for gene expression is a source of phenotypic variation for natural and agricultural species. The common approach to map and to quantify gene expression from genetically distinct individuals is to assign their RNA-seq reads to a single reference genome. However, RNA-seq...

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Detalles Bibliográficos
Autores principales: Zhan, Shuhua, Griswold, Cortland, Lukens, Lewis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056621/
https://www.ncbi.nlm.nih.gov/pubmed/33874908
http://dx.doi.org/10.1186/s12864-021-07577-3

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