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Polo: an open-source graphical user interface for crystallization screening

Polo is a Python-based graphical user interface designed to streamline viewing and analysis of images to monitor crystal growth, with a specific target to enable users of the High-Throughput Crystallization Screening Center at Hauptman-Woodward Medical Research Institute (HWI) to efficiently inspect...

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Detalles Bibliográficos
Autores principales: Holleman, Ethan T., Duguid, Erica, Keefe, Lisa J., Bowman, Sarah E. J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056757/
https://www.ncbi.nlm.nih.gov/pubmed/33953660
http://dx.doi.org/10.1107/S1600576721000108
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author Holleman, Ethan T.
Duguid, Erica
Keefe, Lisa J.
Bowman, Sarah E. J.
author_facet Holleman, Ethan T.
Duguid, Erica
Keefe, Lisa J.
Bowman, Sarah E. J.
author_sort Holleman, Ethan T.
collection PubMed
description Polo is a Python-based graphical user interface designed to streamline viewing and analysis of images to monitor crystal growth, with a specific target to enable users of the High-Throughput Crystallization Screening Center at Hauptman-Woodward Medical Research Institute (HWI) to efficiently inspect their crystallization experiments. Polo aims to increase efficiency, reducing time spent manually reviewing crystallization images, and to improve the potential of identifying positive crystallization conditions. Polo provides a streamlined one-click graphical interface for the Machine Recognition of Crystallization Outcomes (MARCO) convolutional neural network for automated image classification, as well as powerful tools to view and score crystallization images, to compare crystallization conditions, and to facilitate collaborative review of crystallization screening results. Crystallization images need not have been captured at HWI to utilize Polo’s basic functionality. Polo is free to use and modify for both academic and commercial use under the terms of the copyleft GNU General Public License v3.0.
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spelling pubmed-80567572021-05-04 Polo: an open-source graphical user interface for crystallization screening Holleman, Ethan T. Duguid, Erica Keefe, Lisa J. Bowman, Sarah E. J. J Appl Crystallogr Computer Programs Polo is a Python-based graphical user interface designed to streamline viewing and analysis of images to monitor crystal growth, with a specific target to enable users of the High-Throughput Crystallization Screening Center at Hauptman-Woodward Medical Research Institute (HWI) to efficiently inspect their crystallization experiments. Polo aims to increase efficiency, reducing time spent manually reviewing crystallization images, and to improve the potential of identifying positive crystallization conditions. Polo provides a streamlined one-click graphical interface for the Machine Recognition of Crystallization Outcomes (MARCO) convolutional neural network for automated image classification, as well as powerful tools to view and score crystallization images, to compare crystallization conditions, and to facilitate collaborative review of crystallization screening results. Crystallization images need not have been captured at HWI to utilize Polo’s basic functionality. Polo is free to use and modify for both academic and commercial use under the terms of the copyleft GNU General Public License v3.0. International Union of Crystallography 2021-02-19 /pmc/articles/PMC8056757/ /pubmed/33953660 http://dx.doi.org/10.1107/S1600576721000108 Text en © Ethan T. Holleman et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Computer Programs
Holleman, Ethan T.
Duguid, Erica
Keefe, Lisa J.
Bowman, Sarah E. J.
Polo: an open-source graphical user interface for crystallization screening
title Polo: an open-source graphical user interface for crystallization screening
title_full Polo: an open-source graphical user interface for crystallization screening
title_fullStr Polo: an open-source graphical user interface for crystallization screening
title_full_unstemmed Polo: an open-source graphical user interface for crystallization screening
title_short Polo: an open-source graphical user interface for crystallization screening
title_sort polo: an open-source graphical user interface for crystallization screening
topic Computer Programs
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056757/
https://www.ncbi.nlm.nih.gov/pubmed/33953660
http://dx.doi.org/10.1107/S1600576721000108
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