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Polo: an open-source graphical user interface for crystallization screening
Polo is a Python-based graphical user interface designed to streamline viewing and analysis of images to monitor crystal growth, with a specific target to enable users of the High-Throughput Crystallization Screening Center at Hauptman-Woodward Medical Research Institute (HWI) to efficiently inspect...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056757/ https://www.ncbi.nlm.nih.gov/pubmed/33953660 http://dx.doi.org/10.1107/S1600576721000108 |
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author | Holleman, Ethan T. Duguid, Erica Keefe, Lisa J. Bowman, Sarah E. J. |
author_facet | Holleman, Ethan T. Duguid, Erica Keefe, Lisa J. Bowman, Sarah E. J. |
author_sort | Holleman, Ethan T. |
collection | PubMed |
description | Polo is a Python-based graphical user interface designed to streamline viewing and analysis of images to monitor crystal growth, with a specific target to enable users of the High-Throughput Crystallization Screening Center at Hauptman-Woodward Medical Research Institute (HWI) to efficiently inspect their crystallization experiments. Polo aims to increase efficiency, reducing time spent manually reviewing crystallization images, and to improve the potential of identifying positive crystallization conditions. Polo provides a streamlined one-click graphical interface for the Machine Recognition of Crystallization Outcomes (MARCO) convolutional neural network for automated image classification, as well as powerful tools to view and score crystallization images, to compare crystallization conditions, and to facilitate collaborative review of crystallization screening results. Crystallization images need not have been captured at HWI to utilize Polo’s basic functionality. Polo is free to use and modify for both academic and commercial use under the terms of the copyleft GNU General Public License v3.0. |
format | Online Article Text |
id | pubmed-8056757 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-80567572021-05-04 Polo: an open-source graphical user interface for crystallization screening Holleman, Ethan T. Duguid, Erica Keefe, Lisa J. Bowman, Sarah E. J. J Appl Crystallogr Computer Programs Polo is a Python-based graphical user interface designed to streamline viewing and analysis of images to monitor crystal growth, with a specific target to enable users of the High-Throughput Crystallization Screening Center at Hauptman-Woodward Medical Research Institute (HWI) to efficiently inspect their crystallization experiments. Polo aims to increase efficiency, reducing time spent manually reviewing crystallization images, and to improve the potential of identifying positive crystallization conditions. Polo provides a streamlined one-click graphical interface for the Machine Recognition of Crystallization Outcomes (MARCO) convolutional neural network for automated image classification, as well as powerful tools to view and score crystallization images, to compare crystallization conditions, and to facilitate collaborative review of crystallization screening results. Crystallization images need not have been captured at HWI to utilize Polo’s basic functionality. Polo is free to use and modify for both academic and commercial use under the terms of the copyleft GNU General Public License v3.0. International Union of Crystallography 2021-02-19 /pmc/articles/PMC8056757/ /pubmed/33953660 http://dx.doi.org/10.1107/S1600576721000108 Text en © Ethan T. Holleman et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Computer Programs Holleman, Ethan T. Duguid, Erica Keefe, Lisa J. Bowman, Sarah E. J. Polo: an open-source graphical user interface for crystallization screening |
title |
Polo: an open-source graphical user interface for crystallization screening |
title_full |
Polo: an open-source graphical user interface for crystallization screening |
title_fullStr |
Polo: an open-source graphical user interface for crystallization screening |
title_full_unstemmed |
Polo: an open-source graphical user interface for crystallization screening |
title_short |
Polo: an open-source graphical user interface for crystallization screening |
title_sort | polo: an open-source graphical user interface for crystallization screening |
topic | Computer Programs |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056757/ https://www.ncbi.nlm.nih.gov/pubmed/33953660 http://dx.doi.org/10.1107/S1600576721000108 |
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