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Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions

An approach for the comparison of pair distribution functions (PDFs) has been developed using a similarity measure based on cross-correlation functions. The PDF is very sensitive to changes in the local structure, i.e. small deviations in the structure can cause large signal shifts and significant d...

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Detalles Bibliográficos
Autores principales: Habermehl, Stefan, Schlesinger, Carina, Prill, Dragica
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056768/
https://www.ncbi.nlm.nih.gov/pubmed/33953658
http://dx.doi.org/10.1107/S1600576721001722
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author Habermehl, Stefan
Schlesinger, Carina
Prill, Dragica
author_facet Habermehl, Stefan
Schlesinger, Carina
Prill, Dragica
author_sort Habermehl, Stefan
collection PubMed
description An approach for the comparison of pair distribution functions (PDFs) has been developed using a similarity measure based on cross-correlation functions. The PDF is very sensitive to changes in the local structure, i.e. small deviations in the structure can cause large signal shifts and significant discrepancies between the PDFs. Therefore, a comparison based on pointwise differences (e.g. R values and difference curves) may lead to the assumption that the investigated PDFs as well as the corresponding structural models are not in agreement at all, whereas a careful visual inspection of the investigated structural models and corresponding PDFs may reveal a relatively good match. To quantify the agreement of different PDFs for those cases an alternative approach is introduced: the similarity measure based on cross-correlation functions. In this paper, the power of this application of the similarity measure to the analysis of PDFs is highlighted. The similarity measure is compared with the classical R (wp) values as representative of the comparison based on pointwise differences as well as with the Pearson product-moment correlation coefficient, using polymorph IV of barbituric acid as an example.
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spelling pubmed-80567682021-05-04 Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions Habermehl, Stefan Schlesinger, Carina Prill, Dragica J Appl Crystallogr Research Papers An approach for the comparison of pair distribution functions (PDFs) has been developed using a similarity measure based on cross-correlation functions. The PDF is very sensitive to changes in the local structure, i.e. small deviations in the structure can cause large signal shifts and significant discrepancies between the PDFs. Therefore, a comparison based on pointwise differences (e.g. R values and difference curves) may lead to the assumption that the investigated PDFs as well as the corresponding structural models are not in agreement at all, whereas a careful visual inspection of the investigated structural models and corresponding PDFs may reveal a relatively good match. To quantify the agreement of different PDFs for those cases an alternative approach is introduced: the similarity measure based on cross-correlation functions. In this paper, the power of this application of the similarity measure to the analysis of PDFs is highlighted. The similarity measure is compared with the classical R (wp) values as representative of the comparison based on pointwise differences as well as with the Pearson product-moment correlation coefficient, using polymorph IV of barbituric acid as an example. International Union of Crystallography 2021-03-31 /pmc/articles/PMC8056768/ /pubmed/33953658 http://dx.doi.org/10.1107/S1600576721001722 Text en © Stefan Habermehl et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Habermehl, Stefan
Schlesinger, Carina
Prill, Dragica
Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions
title Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions
title_full Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions
title_fullStr Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions
title_full_unstemmed Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions
title_short Comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions
title_sort comparison and evaluation of pair distribution functions, using a similarity measure based on cross-correlation functions
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8056768/
https://www.ncbi.nlm.nih.gov/pubmed/33953658
http://dx.doi.org/10.1107/S1600576721001722
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