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Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models
Using monthly data from the Ebola-outbreak 2013–2016 in West Africa, we compared two calibrations for data fitting, least-squares (SSE) and weighted least-squares (SWSE) with weights reciprocal to the number of new infections. To compare (in hindsight) forecasts for the final disease size (the actua...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cambridge University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8057487/ https://www.ncbi.nlm.nih.gov/pubmed/33357248 http://dx.doi.org/10.1017/S0950268820003039 |
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author | Brunner, Norbert Kühleitner, Manfred |
author_facet | Brunner, Norbert Kühleitner, Manfred |
author_sort | Brunner, Norbert |
collection | PubMed |
description | Using monthly data from the Ebola-outbreak 2013–2016 in West Africa, we compared two calibrations for data fitting, least-squares (SSE) and weighted least-squares (SWSE) with weights reciprocal to the number of new infections. To compare (in hindsight) forecasts for the final disease size (the actual value was observed at month 28 of the outbreak) we fitted Bertalanffy–Pütter growth models to truncated initial data (first 11, 12, …, 28 months). The growth curves identified the epidemic peak at month 10 and the relative errors of the forecasts (asymptotic limits) were below 10%, if 16 or more month were used; for SWSE the relative errors were smaller than for SSE. However, the calibrations differed insofar as for SWSE there were good fitting models that forecasted reasonable upper and lower bounds, while SSE was biased, as the forecasts of good fitting models systematically underestimated the final disease size. Furthermore, for SSE the normal distribution hypothesis of the fit residuals was refuted, while the similar hypothesis for SWSE was not refuted. We therefore recommend considering SWSE for epidemic forecasts. |
format | Online Article Text |
id | pubmed-8057487 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Cambridge University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-80574872021-05-04 Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models Brunner, Norbert Kühleitner, Manfred Epidemiol Infect Original Paper Using monthly data from the Ebola-outbreak 2013–2016 in West Africa, we compared two calibrations for data fitting, least-squares (SSE) and weighted least-squares (SWSE) with weights reciprocal to the number of new infections. To compare (in hindsight) forecasts for the final disease size (the actual value was observed at month 28 of the outbreak) we fitted Bertalanffy–Pütter growth models to truncated initial data (first 11, 12, …, 28 months). The growth curves identified the epidemic peak at month 10 and the relative errors of the forecasts (asymptotic limits) were below 10%, if 16 or more month were used; for SWSE the relative errors were smaller than for SSE. However, the calibrations differed insofar as for SWSE there were good fitting models that forecasted reasonable upper and lower bounds, while SSE was biased, as the forecasts of good fitting models systematically underestimated the final disease size. Furthermore, for SSE the normal distribution hypothesis of the fit residuals was refuted, while the similar hypothesis for SWSE was not refuted. We therefore recommend considering SWSE for epidemic forecasts. Cambridge University Press 2020-12-28 /pmc/articles/PMC8057487/ /pubmed/33357248 http://dx.doi.org/10.1017/S0950268820003039 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Paper Brunner, Norbert Kühleitner, Manfred Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models |
title | Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models |
title_full | Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models |
title_fullStr | Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models |
title_full_unstemmed | Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models |
title_short | Forecasting the final disease size: comparing calibrations of Bertalanffy–Pütter models |
title_sort | forecasting the final disease size: comparing calibrations of bertalanffy–pütter models |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8057487/ https://www.ncbi.nlm.nih.gov/pubmed/33357248 http://dx.doi.org/10.1017/S0950268820003039 |
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