Cargando…

SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway

BACKGROUND: Acute myocardial infarction (AMI) is myocardial necrosis caused by acute coronary ischemia and hypoxia. It can be complicated by arrhythmia, shock, heart failure and other symptoms that can be life-threatening. A multi-regulator driven dysfunction module for AMI was constructed. It is in...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Lijie, Yu, Fengxia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8059031/
https://www.ncbi.nlm.nih.gov/pubmed/33879068
http://dx.doi.org/10.1186/s12872-021-02011-8
_version_ 1783681128790491136
author Wang, Lijie
Yu, Fengxia
author_facet Wang, Lijie
Yu, Fengxia
author_sort Wang, Lijie
collection PubMed
description BACKGROUND: Acute myocardial infarction (AMI) is myocardial necrosis caused by acute coronary ischemia and hypoxia. It can be complicated by arrhythmia, shock, heart failure and other symptoms that can be life-threatening. A multi-regulator driven dysfunction module for AMI was constructed. It is intended to explore the pathogenesis and functional pathways regulation of acute myocardial infarction. METHODS: Combining differential expression analysis, co-expression analysis, and the functional enrichment analysis, a set of expression disorder modules related to AMI was obtained. Hypergeometric test was performed to calculate the potential regulatory effects of multiple factors on the module, identifying a range of non-coding RNA and transcription factors. RESULTS: A total of 4551 differentially expressed genes for AMI and seven co-expression modules were obtained. These modules are primarily involved in the metabolic processes of prostaglandin transport processes, regulating DNA recombination and AMPK signal transduction. Based on this set of functional modules, 3 of 24 transcription factors (TFs) including NFKB1, MECP2 and SIRT1, and 3 of 782 non-coding RNA including miR-519D-3P, TUG1 and miR-93-5p were obtained. These core regulators are thought to be involved in the progression of AMI disease. Through the AMPK signal transduction, the critical gene stearoyl-CoA desaturase (SCD) can lead to the occurrence and development of AMI. CONCLUSIONS: In this study, a dysfunction module was used to explore the pathogenesis of multifactorial mediated AMI and provided new methods and ideas for subsequent research. It helps researchers to have a deeper understanding of its potential pathogenesis. The conclusion provides a theoretical basis for biologists to design further experiments related to AMI. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12872-021-02011-8.
format Online
Article
Text
id pubmed-8059031
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-80590312021-04-21 SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway Wang, Lijie Yu, Fengxia BMC Cardiovasc Disord Research Article BACKGROUND: Acute myocardial infarction (AMI) is myocardial necrosis caused by acute coronary ischemia and hypoxia. It can be complicated by arrhythmia, shock, heart failure and other symptoms that can be life-threatening. A multi-regulator driven dysfunction module for AMI was constructed. It is intended to explore the pathogenesis and functional pathways regulation of acute myocardial infarction. METHODS: Combining differential expression analysis, co-expression analysis, and the functional enrichment analysis, a set of expression disorder modules related to AMI was obtained. Hypergeometric test was performed to calculate the potential regulatory effects of multiple factors on the module, identifying a range of non-coding RNA and transcription factors. RESULTS: A total of 4551 differentially expressed genes for AMI and seven co-expression modules were obtained. These modules are primarily involved in the metabolic processes of prostaglandin transport processes, regulating DNA recombination and AMPK signal transduction. Based on this set of functional modules, 3 of 24 transcription factors (TFs) including NFKB1, MECP2 and SIRT1, and 3 of 782 non-coding RNA including miR-519D-3P, TUG1 and miR-93-5p were obtained. These core regulators are thought to be involved in the progression of AMI disease. Through the AMPK signal transduction, the critical gene stearoyl-CoA desaturase (SCD) can lead to the occurrence and development of AMI. CONCLUSIONS: In this study, a dysfunction module was used to explore the pathogenesis of multifactorial mediated AMI and provided new methods and ideas for subsequent research. It helps researchers to have a deeper understanding of its potential pathogenesis. The conclusion provides a theoretical basis for biologists to design further experiments related to AMI. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12872-021-02011-8. BioMed Central 2021-04-20 /pmc/articles/PMC8059031/ /pubmed/33879068 http://dx.doi.org/10.1186/s12872-021-02011-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Wang, Lijie
Yu, Fengxia
SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway
title SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway
title_full SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway
title_fullStr SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway
title_full_unstemmed SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway
title_short SCD leads to the development and progression of acute myocardial infarction through the AMPK signaling pathway
title_sort scd leads to the development and progression of acute myocardial infarction through the ampk signaling pathway
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8059031/
https://www.ncbi.nlm.nih.gov/pubmed/33879068
http://dx.doi.org/10.1186/s12872-021-02011-8
work_keys_str_mv AT wanglijie scdleadstothedevelopmentandprogressionofacutemyocardialinfarctionthroughtheampksignalingpathway
AT yufengxia scdleadstothedevelopmentandprogressionofacutemyocardialinfarctionthroughtheampksignalingpathway