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A tunable population timer in multicellular consortia

Processing time-dependent information requires cells to quantify the duration of past regulatory events and program the time span of future signals. At the single-cell level, timer mechanisms can be implemented with genetic circuits. However, such systems are difficult to implement in single cells d...

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Autores principales: Toscano-Ochoa, Carlos, Garcia-Ojalvo, Jordi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8059065/
https://www.ncbi.nlm.nih.gov/pubmed/33898944
http://dx.doi.org/10.1016/j.isci.2021.102347
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author Toscano-Ochoa, Carlos
Garcia-Ojalvo, Jordi
author_facet Toscano-Ochoa, Carlos
Garcia-Ojalvo, Jordi
author_sort Toscano-Ochoa, Carlos
collection PubMed
description Processing time-dependent information requires cells to quantify the duration of past regulatory events and program the time span of future signals. At the single-cell level, timer mechanisms can be implemented with genetic circuits. However, such systems are difficult to implement in single cells due to saturation in molecular components and stochasticity in the limited intracellular space. In contrast, multicellular implementations outsource some of the components of information-processing circuits to the extracellular space, potentially escaping these constraints. Here, we develop a theoretical framework, based on trilinear coordinate representation, to study the collective behavior of populations composed of three cell types under stationary conditions. This framework reveals that distributing different processes (in our case the production, detection and degradation of a time-encoding signal) across distinct strains enables the implementation of a multicellular timer. Our analysis also shows that the circuit can be easily tunable by varying the cellular composition of the consortium.
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spelling pubmed-80590652021-04-23 A tunable population timer in multicellular consortia Toscano-Ochoa, Carlos Garcia-Ojalvo, Jordi iScience Article Processing time-dependent information requires cells to quantify the duration of past regulatory events and program the time span of future signals. At the single-cell level, timer mechanisms can be implemented with genetic circuits. However, such systems are difficult to implement in single cells due to saturation in molecular components and stochasticity in the limited intracellular space. In contrast, multicellular implementations outsource some of the components of information-processing circuits to the extracellular space, potentially escaping these constraints. Here, we develop a theoretical framework, based on trilinear coordinate representation, to study the collective behavior of populations composed of three cell types under stationary conditions. This framework reveals that distributing different processes (in our case the production, detection and degradation of a time-encoding signal) across distinct strains enables the implementation of a multicellular timer. Our analysis also shows that the circuit can be easily tunable by varying the cellular composition of the consortium. Elsevier 2021-03-25 /pmc/articles/PMC8059065/ /pubmed/33898944 http://dx.doi.org/10.1016/j.isci.2021.102347 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Toscano-Ochoa, Carlos
Garcia-Ojalvo, Jordi
A tunable population timer in multicellular consortia
title A tunable population timer in multicellular consortia
title_full A tunable population timer in multicellular consortia
title_fullStr A tunable population timer in multicellular consortia
title_full_unstemmed A tunable population timer in multicellular consortia
title_short A tunable population timer in multicellular consortia
title_sort tunable population timer in multicellular consortia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8059065/
https://www.ncbi.nlm.nih.gov/pubmed/33898944
http://dx.doi.org/10.1016/j.isci.2021.102347
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