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The Clinical Implications of Tumor Mutational Burden in Osteosarcoma
BACKGROUND: Osteosarcoma (OTS) is aggressive bone malignancy without well-recognized prognosis biomarker. Tumor mutational burden (TMB) has been proved as effective biomarker in predicting clinical outcomes in several cancer types. However, its prognostic value in OTS remains unknown. In this study,...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8059407/ https://www.ncbi.nlm.nih.gov/pubmed/33898301 http://dx.doi.org/10.3389/fonc.2020.595527 |
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author | Xie, Lu Yang, Yufei Guo, Wei Che, Dongxue Xu, Jie Sun, Xin Liu, Kuisheng Ren, Tingting Liu, Xingyu Yang, Yi Ji, Tao Tang, Xiaodong |
author_facet | Xie, Lu Yang, Yufei Guo, Wei Che, Dongxue Xu, Jie Sun, Xin Liu, Kuisheng Ren, Tingting Liu, Xingyu Yang, Yi Ji, Tao Tang, Xiaodong |
author_sort | Xie, Lu |
collection | PubMed |
description | BACKGROUND: Osteosarcoma (OTS) is aggressive bone malignancy without well-recognized prognosis biomarker. Tumor mutational burden (TMB) has been proved as effective biomarker in predicting clinical outcomes in several cancer types. However, its prognostic value in OTS remains unknown. In this study, we aim to evaluate the implication of TMB in OTS patients. METHODS: To depict the landscape of somatic mutations in OTS, we performed Whole-Exome Sequencing (WES) on 31 OTS tissue samples and corresponding White Blood Cells (WBCs) as matched control. TMB was calculated as the total number of somatic alterations in coding regions normalized to the per sequenced genomic megabase (~30.4Mb in WES). The prognostic values of TMB were evaluated by Kaplan-Meier methods and Cox regression models. RESULTS: The median age was 16.0 years at diagnosis, and 54.8% of patients were male. The most common genetic alterations were mainly involved in cell cycle and DNA damage response and repair, including H3F3A, TP53, MYC, and CDKN2A/B. The median progression-free survival (PFS) was 775.5 days in TMB-High (defined as third quartile of TMB value, <2.565) versus 351 days in TMB-Low (<2.565). All patients with TMB-High are PFS-Long (>400 days), while 36.4% of all patients with TMB-Low were PFS-Long (P=0.003). TMB were significantly greater in PFS-Long than in PFS-Short (<400 days) (P=0.002). Moreover, the median overall survival (OS) was 1,307 days in TMB-High versus 672.5 days in TMB-Low. Furthermore, TMB-High group had significantly improved PFS (P=0.04) and OS (P=0.03). CONCLUSIONS: TMB-High can be used as prognostic marker for OTS. Our findings demonstrate that TMB may be helpful in combination with traditionally clinicopathologic risk factors to optimize risk stratification and guide treatment decisions. |
format | Online Article Text |
id | pubmed-8059407 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80594072021-04-22 The Clinical Implications of Tumor Mutational Burden in Osteosarcoma Xie, Lu Yang, Yufei Guo, Wei Che, Dongxue Xu, Jie Sun, Xin Liu, Kuisheng Ren, Tingting Liu, Xingyu Yang, Yi Ji, Tao Tang, Xiaodong Front Oncol Oncology BACKGROUND: Osteosarcoma (OTS) is aggressive bone malignancy without well-recognized prognosis biomarker. Tumor mutational burden (TMB) has been proved as effective biomarker in predicting clinical outcomes in several cancer types. However, its prognostic value in OTS remains unknown. In this study, we aim to evaluate the implication of TMB in OTS patients. METHODS: To depict the landscape of somatic mutations in OTS, we performed Whole-Exome Sequencing (WES) on 31 OTS tissue samples and corresponding White Blood Cells (WBCs) as matched control. TMB was calculated as the total number of somatic alterations in coding regions normalized to the per sequenced genomic megabase (~30.4Mb in WES). The prognostic values of TMB were evaluated by Kaplan-Meier methods and Cox regression models. RESULTS: The median age was 16.0 years at diagnosis, and 54.8% of patients were male. The most common genetic alterations were mainly involved in cell cycle and DNA damage response and repair, including H3F3A, TP53, MYC, and CDKN2A/B. The median progression-free survival (PFS) was 775.5 days in TMB-High (defined as third quartile of TMB value, <2.565) versus 351 days in TMB-Low (<2.565). All patients with TMB-High are PFS-Long (>400 days), while 36.4% of all patients with TMB-Low were PFS-Long (P=0.003). TMB were significantly greater in PFS-Long than in PFS-Short (<400 days) (P=0.002). Moreover, the median overall survival (OS) was 1,307 days in TMB-High versus 672.5 days in TMB-Low. Furthermore, TMB-High group had significantly improved PFS (P=0.04) and OS (P=0.03). CONCLUSIONS: TMB-High can be used as prognostic marker for OTS. Our findings demonstrate that TMB may be helpful in combination with traditionally clinicopathologic risk factors to optimize risk stratification and guide treatment decisions. Frontiers Media S.A. 2021-04-07 /pmc/articles/PMC8059407/ /pubmed/33898301 http://dx.doi.org/10.3389/fonc.2020.595527 Text en Copyright © 2021 Xie, Yang, Guo, Che, Xu, Sun, Liu, Ren, Liu, Yang, Ji and Tang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Xie, Lu Yang, Yufei Guo, Wei Che, Dongxue Xu, Jie Sun, Xin Liu, Kuisheng Ren, Tingting Liu, Xingyu Yang, Yi Ji, Tao Tang, Xiaodong The Clinical Implications of Tumor Mutational Burden in Osteosarcoma |
title | The Clinical Implications of Tumor Mutational Burden in Osteosarcoma |
title_full | The Clinical Implications of Tumor Mutational Burden in Osteosarcoma |
title_fullStr | The Clinical Implications of Tumor Mutational Burden in Osteosarcoma |
title_full_unstemmed | The Clinical Implications of Tumor Mutational Burden in Osteosarcoma |
title_short | The Clinical Implications of Tumor Mutational Burden in Osteosarcoma |
title_sort | clinical implications of tumor mutational burden in osteosarcoma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8059407/ https://www.ncbi.nlm.nih.gov/pubmed/33898301 http://dx.doi.org/10.3389/fonc.2020.595527 |
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