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Diffusion modeling of COVID-19 under lockdown
Viral immune evasion by sequence variation is a significant barrier to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine design and coronavirus disease-2019 diffusion under lockdown are unpredictable with subsequent waves. Our group has developed a computational model rooted in ph...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AIP Publishing LLC
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8060971/ https://www.ncbi.nlm.nih.gov/pubmed/33897246 http://dx.doi.org/10.1063/5.0044061 |
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author | Serra, Nicola Di Carlo, Paola Rea, Teresa Sergi, Consolato M. |
author_facet | Serra, Nicola Di Carlo, Paola Rea, Teresa Sergi, Consolato M. |
author_sort | Serra, Nicola |
collection | PubMed |
description | Viral immune evasion by sequence variation is a significant barrier to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine design and coronavirus disease-2019 diffusion under lockdown are unpredictable with subsequent waves. Our group has developed a computational model rooted in physics to address this challenge, aiming to predict the fitness landscape of SARS-CoV-2 diffusion using a variant of the bidimensional Ising model (2DIMV) connected seasonally. The 2DIMV works in a closed system composed of limited interaction subjects and conditioned by only temperature changes. Markov chain Monte Carlo method shows that an increase in temperature implicates reduced virus diffusion and increased mobility, leading to increased virus diffusion. |
format | Online Article Text |
id | pubmed-8060971 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AIP Publishing LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-80609712021-04-22 Diffusion modeling of COVID-19 under lockdown Serra, Nicola Di Carlo, Paola Rea, Teresa Sergi, Consolato M. Phys Fluids (1994) ARTICLES Viral immune evasion by sequence variation is a significant barrier to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine design and coronavirus disease-2019 diffusion under lockdown are unpredictable with subsequent waves. Our group has developed a computational model rooted in physics to address this challenge, aiming to predict the fitness landscape of SARS-CoV-2 diffusion using a variant of the bidimensional Ising model (2DIMV) connected seasonally. The 2DIMV works in a closed system composed of limited interaction subjects and conditioned by only temperature changes. Markov chain Monte Carlo method shows that an increase in temperature implicates reduced virus diffusion and increased mobility, leading to increased virus diffusion. AIP Publishing LLC 2021-04 2021-04-12 /pmc/articles/PMC8060971/ /pubmed/33897246 http://dx.doi.org/10.1063/5.0044061 Text en © 2021 Author(s) Published under license by AIP Publishing. 1070-6631/2021/33(4)/041903/6/$30.00 https://creativecommons.org/licenses/by/4.0/All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | ARTICLES Serra, Nicola Di Carlo, Paola Rea, Teresa Sergi, Consolato M. Diffusion modeling of COVID-19 under lockdown |
title | Diffusion modeling of COVID-19 under lockdown |
title_full | Diffusion modeling of COVID-19 under lockdown |
title_fullStr | Diffusion modeling of COVID-19 under lockdown |
title_full_unstemmed | Diffusion modeling of COVID-19 under lockdown |
title_short | Diffusion modeling of COVID-19 under lockdown |
title_sort | diffusion modeling of covid-19 under lockdown |
topic | ARTICLES |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8060971/ https://www.ncbi.nlm.nih.gov/pubmed/33897246 http://dx.doi.org/10.1063/5.0044061 |
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