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Diffusion modeling of COVID-19 under lockdown

Viral immune evasion by sequence variation is a significant barrier to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine design and coronavirus disease-2019 diffusion under lockdown are unpredictable with subsequent waves. Our group has developed a computational model rooted in ph...

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Detalles Bibliográficos
Autores principales: Serra, Nicola, Di Carlo, Paola, Rea, Teresa, Sergi, Consolato M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AIP Publishing LLC 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8060971/
https://www.ncbi.nlm.nih.gov/pubmed/33897246
http://dx.doi.org/10.1063/5.0044061
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author Serra, Nicola
Di Carlo, Paola
Rea, Teresa
Sergi, Consolato M.
author_facet Serra, Nicola
Di Carlo, Paola
Rea, Teresa
Sergi, Consolato M.
author_sort Serra, Nicola
collection PubMed
description Viral immune evasion by sequence variation is a significant barrier to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine design and coronavirus disease-2019 diffusion under lockdown are unpredictable with subsequent waves. Our group has developed a computational model rooted in physics to address this challenge, aiming to predict the fitness landscape of SARS-CoV-2 diffusion using a variant of the bidimensional Ising model (2DIMV) connected seasonally. The 2DIMV works in a closed system composed of limited interaction subjects and conditioned by only temperature changes. Markov chain Monte Carlo method shows that an increase in temperature implicates reduced virus diffusion and increased mobility, leading to increased virus diffusion.
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spelling pubmed-80609712021-04-22 Diffusion modeling of COVID-19 under lockdown Serra, Nicola Di Carlo, Paola Rea, Teresa Sergi, Consolato M. Phys Fluids (1994) ARTICLES Viral immune evasion by sequence variation is a significant barrier to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccine design and coronavirus disease-2019 diffusion under lockdown are unpredictable with subsequent waves. Our group has developed a computational model rooted in physics to address this challenge, aiming to predict the fitness landscape of SARS-CoV-2 diffusion using a variant of the bidimensional Ising model (2DIMV) connected seasonally. The 2DIMV works in a closed system composed of limited interaction subjects and conditioned by only temperature changes. Markov chain Monte Carlo method shows that an increase in temperature implicates reduced virus diffusion and increased mobility, leading to increased virus diffusion. AIP Publishing LLC 2021-04 2021-04-12 /pmc/articles/PMC8060971/ /pubmed/33897246 http://dx.doi.org/10.1063/5.0044061 Text en © 2021 Author(s) Published under license by AIP Publishing. 1070-6631/2021/33(4)/041903/6/$30.00 https://creativecommons.org/licenses/by/4.0/All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle ARTICLES
Serra, Nicola
Di Carlo, Paola
Rea, Teresa
Sergi, Consolato M.
Diffusion modeling of COVID-19 under lockdown
title Diffusion modeling of COVID-19 under lockdown
title_full Diffusion modeling of COVID-19 under lockdown
title_fullStr Diffusion modeling of COVID-19 under lockdown
title_full_unstemmed Diffusion modeling of COVID-19 under lockdown
title_short Diffusion modeling of COVID-19 under lockdown
title_sort diffusion modeling of covid-19 under lockdown
topic ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8060971/
https://www.ncbi.nlm.nih.gov/pubmed/33897246
http://dx.doi.org/10.1063/5.0044061
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