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Evolution of isoprene emission in Arecaceae (palms)

Isoprene synthase (IspS) is the sole enzyme in plants responsible for the yearly emission in the atmosphere of thousands of tonnes of the natural hydrocarbon isoprene worldwide. Species of the monocotyledonous family Arecaceae (palms) are among the highest plant emitters, but to date no IspS gene fr...

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Autores principales: Li, Mingai, Xu, Jia, Lyu, Fuling, Khomenko, Iuliia, Biasioli, Franco, Villani, Mariacristina, Baldan, Barbara, Varotto, Claudio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8061277/
https://www.ncbi.nlm.nih.gov/pubmed/33897811
http://dx.doi.org/10.1111/eva.13169
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author Li, Mingai
Xu, Jia
Lyu, Fuling
Khomenko, Iuliia
Biasioli, Franco
Villani, Mariacristina
Baldan, Barbara
Varotto, Claudio
author_facet Li, Mingai
Xu, Jia
Lyu, Fuling
Khomenko, Iuliia
Biasioli, Franco
Villani, Mariacristina
Baldan, Barbara
Varotto, Claudio
author_sort Li, Mingai
collection PubMed
description Isoprene synthase (IspS) is the sole enzyme in plants responsible for the yearly emission in the atmosphere of thousands of tonnes of the natural hydrocarbon isoprene worldwide. Species of the monocotyledonous family Arecaceae (palms) are among the highest plant emitters, but to date no IspS gene from this family has been identified. Here, we screened with PTR‐ToF‐MS 18 genera of the Arecaceae for isoprene emission and found that the majority of the sampled species emits isoprene. Putative IspS genes from six different genera were sequenced and three of them were functionally characterized by heterologous overexpression in Arabidopsis thaliana, demonstrating that they encode functional IspS genes. Site‐directed mutagenesis and expression in Arabidopsis demonstrated the functional relevance of a novel IspS diagnostic tetrad from Arecaceae, whose most variable amino acids could not preserve catalytic function when substituted by a putatively dicotyledonous‐specific tetrad. In particular, mutation of threonine 479 likely impairs the open–closed transition of the enzyme by altering the network of hydrogen bonds between helices H1α, H, and I. These results shed new light on the evolution of IspS in monocots, suggesting that isoprene emission is an ancestral trait within the Arecaceae family. The identification of IspS from Arecaceae provides promising novel enzymes for the production of isoprene in heterologous systems and allows the screening and selection of commercially relevant palm varieties with lower environmental impact.
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spelling pubmed-80612772021-04-23 Evolution of isoprene emission in Arecaceae (palms) Li, Mingai Xu, Jia Lyu, Fuling Khomenko, Iuliia Biasioli, Franco Villani, Mariacristina Baldan, Barbara Varotto, Claudio Evol Appl Original Articles Isoprene synthase (IspS) is the sole enzyme in plants responsible for the yearly emission in the atmosphere of thousands of tonnes of the natural hydrocarbon isoprene worldwide. Species of the monocotyledonous family Arecaceae (palms) are among the highest plant emitters, but to date no IspS gene from this family has been identified. Here, we screened with PTR‐ToF‐MS 18 genera of the Arecaceae for isoprene emission and found that the majority of the sampled species emits isoprene. Putative IspS genes from six different genera were sequenced and three of them were functionally characterized by heterologous overexpression in Arabidopsis thaliana, demonstrating that they encode functional IspS genes. Site‐directed mutagenesis and expression in Arabidopsis demonstrated the functional relevance of a novel IspS diagnostic tetrad from Arecaceae, whose most variable amino acids could not preserve catalytic function when substituted by a putatively dicotyledonous‐specific tetrad. In particular, mutation of threonine 479 likely impairs the open–closed transition of the enzyme by altering the network of hydrogen bonds between helices H1α, H, and I. These results shed new light on the evolution of IspS in monocots, suggesting that isoprene emission is an ancestral trait within the Arecaceae family. The identification of IspS from Arecaceae provides promising novel enzymes for the production of isoprene in heterologous systems and allows the screening and selection of commercially relevant palm varieties with lower environmental impact. John Wiley and Sons Inc. 2020-12-14 /pmc/articles/PMC8061277/ /pubmed/33897811 http://dx.doi.org/10.1111/eva.13169 Text en © 2020 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Li, Mingai
Xu, Jia
Lyu, Fuling
Khomenko, Iuliia
Biasioli, Franco
Villani, Mariacristina
Baldan, Barbara
Varotto, Claudio
Evolution of isoprene emission in Arecaceae (palms)
title Evolution of isoprene emission in Arecaceae (palms)
title_full Evolution of isoprene emission in Arecaceae (palms)
title_fullStr Evolution of isoprene emission in Arecaceae (palms)
title_full_unstemmed Evolution of isoprene emission in Arecaceae (palms)
title_short Evolution of isoprene emission in Arecaceae (palms)
title_sort evolution of isoprene emission in arecaceae (palms)
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8061277/
https://www.ncbi.nlm.nih.gov/pubmed/33897811
http://dx.doi.org/10.1111/eva.13169
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