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Position preference of essential genes in prokaryotic operons
Essential genes, which form the basis of life activities, are crucial for the survival of organisms. Essential genes tend to be located in operons, but how they are distributed in operons is still unclear for most prokaryotes. In order to clarify the general rule of position preference of essential...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8061932/ https://www.ncbi.nlm.nih.gov/pubmed/33886641 http://dx.doi.org/10.1371/journal.pone.0250380 |
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author | Liu, Tao Luo, Hao Gao, Feng |
author_facet | Liu, Tao Luo, Hao Gao, Feng |
author_sort | Liu, Tao |
collection | PubMed |
description | Essential genes, which form the basis of life activities, are crucial for the survival of organisms. Essential genes tend to be located in operons, but how they are distributed in operons is still unclear for most prokaryotes. In order to clarify the general rule of position preference of essential genes in operons, an index of the average position of genes in an operon was proposed, and the distributions of essential and non-essential genes in operons in 51 bacterial genomes and two archaeal genomes were analyzed based on this new index. Consequently, essential genes were found to preferentially occupy the front positions of the operons, which tend to be expressed at higher levels. |
format | Online Article Text |
id | pubmed-8061932 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-80619322021-05-04 Position preference of essential genes in prokaryotic operons Liu, Tao Luo, Hao Gao, Feng PLoS One Research Article Essential genes, which form the basis of life activities, are crucial for the survival of organisms. Essential genes tend to be located in operons, but how they are distributed in operons is still unclear for most prokaryotes. In order to clarify the general rule of position preference of essential genes in operons, an index of the average position of genes in an operon was proposed, and the distributions of essential and non-essential genes in operons in 51 bacterial genomes and two archaeal genomes were analyzed based on this new index. Consequently, essential genes were found to preferentially occupy the front positions of the operons, which tend to be expressed at higher levels. Public Library of Science 2021-04-22 /pmc/articles/PMC8061932/ /pubmed/33886641 http://dx.doi.org/10.1371/journal.pone.0250380 Text en © 2021 Liu et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Liu, Tao Luo, Hao Gao, Feng Position preference of essential genes in prokaryotic operons |
title | Position preference of essential genes in prokaryotic operons |
title_full | Position preference of essential genes in prokaryotic operons |
title_fullStr | Position preference of essential genes in prokaryotic operons |
title_full_unstemmed | Position preference of essential genes in prokaryotic operons |
title_short | Position preference of essential genes in prokaryotic operons |
title_sort | position preference of essential genes in prokaryotic operons |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8061932/ https://www.ncbi.nlm.nih.gov/pubmed/33886641 http://dx.doi.org/10.1371/journal.pone.0250380 |
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