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Position preference of essential genes in prokaryotic operons

Essential genes, which form the basis of life activities, are crucial for the survival of organisms. Essential genes tend to be located in operons, but how they are distributed in operons is still unclear for most prokaryotes. In order to clarify the general rule of position preference of essential...

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Detalles Bibliográficos
Autores principales: Liu, Tao, Luo, Hao, Gao, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8061932/
https://www.ncbi.nlm.nih.gov/pubmed/33886641
http://dx.doi.org/10.1371/journal.pone.0250380
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author Liu, Tao
Luo, Hao
Gao, Feng
author_facet Liu, Tao
Luo, Hao
Gao, Feng
author_sort Liu, Tao
collection PubMed
description Essential genes, which form the basis of life activities, are crucial for the survival of organisms. Essential genes tend to be located in operons, but how they are distributed in operons is still unclear for most prokaryotes. In order to clarify the general rule of position preference of essential genes in operons, an index of the average position of genes in an operon was proposed, and the distributions of essential and non-essential genes in operons in 51 bacterial genomes and two archaeal genomes were analyzed based on this new index. Consequently, essential genes were found to preferentially occupy the front positions of the operons, which tend to be expressed at higher levels.
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spelling pubmed-80619322021-05-04 Position preference of essential genes in prokaryotic operons Liu, Tao Luo, Hao Gao, Feng PLoS One Research Article Essential genes, which form the basis of life activities, are crucial for the survival of organisms. Essential genes tend to be located in operons, but how they are distributed in operons is still unclear for most prokaryotes. In order to clarify the general rule of position preference of essential genes in operons, an index of the average position of genes in an operon was proposed, and the distributions of essential and non-essential genes in operons in 51 bacterial genomes and two archaeal genomes were analyzed based on this new index. Consequently, essential genes were found to preferentially occupy the front positions of the operons, which tend to be expressed at higher levels. Public Library of Science 2021-04-22 /pmc/articles/PMC8061932/ /pubmed/33886641 http://dx.doi.org/10.1371/journal.pone.0250380 Text en © 2021 Liu et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Liu, Tao
Luo, Hao
Gao, Feng
Position preference of essential genes in prokaryotic operons
title Position preference of essential genes in prokaryotic operons
title_full Position preference of essential genes in prokaryotic operons
title_fullStr Position preference of essential genes in prokaryotic operons
title_full_unstemmed Position preference of essential genes in prokaryotic operons
title_short Position preference of essential genes in prokaryotic operons
title_sort position preference of essential genes in prokaryotic operons
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8061932/
https://www.ncbi.nlm.nih.gov/pubmed/33886641
http://dx.doi.org/10.1371/journal.pone.0250380
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