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Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique
BACKGROUND: The prevalence of Schistosoma mansoni infection is usually assessed by the Kato-Katz diagnostic technique. However, Kato-Katz thick smears have low sensitivity, especially for light infections. Egg count models fitted on individual level data can adjust for the infection intensity-depend...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8062092/ https://www.ncbi.nlm.nih.gov/pubmed/33819266 http://dx.doi.org/10.1371/journal.pntd.0009310 |
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author | Bärenbold, Oliver Garba, Amadou Colley, Daniel G. Fleming, Fiona M. Assaré, Rufin K. Tukahebwa, Edridah M. Kebede, Biruck Coulibaly, Jean T. N’Goran, Eliézer K. Tchuem Tchuenté, Louis-Albert Mwinzi, Pauline Utzinger, Jürg Vounatsou, Penelope |
author_facet | Bärenbold, Oliver Garba, Amadou Colley, Daniel G. Fleming, Fiona M. Assaré, Rufin K. Tukahebwa, Edridah M. Kebede, Biruck Coulibaly, Jean T. N’Goran, Eliézer K. Tchuem Tchuenté, Louis-Albert Mwinzi, Pauline Utzinger, Jürg Vounatsou, Penelope |
author_sort | Bärenbold, Oliver |
collection | PubMed |
description | BACKGROUND: The prevalence of Schistosoma mansoni infection is usually assessed by the Kato-Katz diagnostic technique. However, Kato-Katz thick smears have low sensitivity, especially for light infections. Egg count models fitted on individual level data can adjust for the infection intensity-dependent sensitivity and estimate the ‘true’ prevalence in a population. However, application of these models is complex and there is a need for adjustments that can be done without modeling expertise. This study provides estimates of the ‘true’ S. mansoni prevalence from population summary measures of observed prevalence and infection intensity using extensive simulations parametrized with data from different settings in sub-Saharan Africa. METHODOLOGY: An individual-level egg count model was applied to Kato-Katz data to determine the S. mansoni infection intensity-dependent sensitivity for various sampling schemes. Observations in populations with varying forces of transmission were simulated, using standard assumptions about the distribution of worms and their mating behavior. Summary measures such as the geometric mean infection, arithmetic mean infection, and the observed prevalence of the simulations were calculated, and parametric statistical models fitted to the summary measures for each sampling scheme. For validation, the simulation-based estimates are compared with an observational dataset not used to inform the simulation. PRINCIPAL FINDINGS: Overall, the sensitivity of Kato-Katz in a population varies according to the mean infection intensity. Using a parametric model, which takes into account different sampling schemes varying from single Kato-Katz to triplicate slides over three days, both geometric and arithmetic mean infection intensities improve estimation of sensitivity. The relation between observed and ‘true’ prevalence is remarkably linear and triplicate slides per day on three consecutive days ensure close to perfect sensitivity. CONCLUSIONS/SIGNIFICANCE: Estimation of ‘true’ S. mansoni prevalence is improved when taking into account geometric or arithmetic mean infection intensity in a population. We supply parametric functions and corresponding estimates of their parameters to calculate the ‘true’ prevalence for sampling schemes up to 3 days with triplicate Kato-Katz thick smears per day that allow estimation of the ‘true’ prevalence. |
format | Online Article Text |
id | pubmed-8062092 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-80620922021-05-04 Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique Bärenbold, Oliver Garba, Amadou Colley, Daniel G. Fleming, Fiona M. Assaré, Rufin K. Tukahebwa, Edridah M. Kebede, Biruck Coulibaly, Jean T. N’Goran, Eliézer K. Tchuem Tchuenté, Louis-Albert Mwinzi, Pauline Utzinger, Jürg Vounatsou, Penelope PLoS Negl Trop Dis Research Article BACKGROUND: The prevalence of Schistosoma mansoni infection is usually assessed by the Kato-Katz diagnostic technique. However, Kato-Katz thick smears have low sensitivity, especially for light infections. Egg count models fitted on individual level data can adjust for the infection intensity-dependent sensitivity and estimate the ‘true’ prevalence in a population. However, application of these models is complex and there is a need for adjustments that can be done without modeling expertise. This study provides estimates of the ‘true’ S. mansoni prevalence from population summary measures of observed prevalence and infection intensity using extensive simulations parametrized with data from different settings in sub-Saharan Africa. METHODOLOGY: An individual-level egg count model was applied to Kato-Katz data to determine the S. mansoni infection intensity-dependent sensitivity for various sampling schemes. Observations in populations with varying forces of transmission were simulated, using standard assumptions about the distribution of worms and their mating behavior. Summary measures such as the geometric mean infection, arithmetic mean infection, and the observed prevalence of the simulations were calculated, and parametric statistical models fitted to the summary measures for each sampling scheme. For validation, the simulation-based estimates are compared with an observational dataset not used to inform the simulation. PRINCIPAL FINDINGS: Overall, the sensitivity of Kato-Katz in a population varies according to the mean infection intensity. Using a parametric model, which takes into account different sampling schemes varying from single Kato-Katz to triplicate slides over three days, both geometric and arithmetic mean infection intensities improve estimation of sensitivity. The relation between observed and ‘true’ prevalence is remarkably linear and triplicate slides per day on three consecutive days ensure close to perfect sensitivity. CONCLUSIONS/SIGNIFICANCE: Estimation of ‘true’ S. mansoni prevalence is improved when taking into account geometric or arithmetic mean infection intensity in a population. We supply parametric functions and corresponding estimates of their parameters to calculate the ‘true’ prevalence for sampling schemes up to 3 days with triplicate Kato-Katz thick smears per day that allow estimation of the ‘true’ prevalence. Public Library of Science 2021-04-05 /pmc/articles/PMC8062092/ /pubmed/33819266 http://dx.doi.org/10.1371/journal.pntd.0009310 Text en © 2021 Bärenbold et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Bärenbold, Oliver Garba, Amadou Colley, Daniel G. Fleming, Fiona M. Assaré, Rufin K. Tukahebwa, Edridah M. Kebede, Biruck Coulibaly, Jean T. N’Goran, Eliézer K. Tchuem Tchuenté, Louis-Albert Mwinzi, Pauline Utzinger, Jürg Vounatsou, Penelope Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique |
title | Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique |
title_full | Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique |
title_fullStr | Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique |
title_full_unstemmed | Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique |
title_short | Estimating true prevalence of Schistosoma mansoni from population summary measures based on the Kato-Katz diagnostic technique |
title_sort | estimating true prevalence of schistosoma mansoni from population summary measures based on the kato-katz diagnostic technique |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8062092/ https://www.ncbi.nlm.nih.gov/pubmed/33819266 http://dx.doi.org/10.1371/journal.pntd.0009310 |
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