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A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography
This paper develops a two-dimensional (2D) radiomics approach with computed tomography (CT) to differentiate between benign and malignant ovarian neoplasms. A retrospective study was conducted from July 2017 to June 2019 for 134 patients with surgically-verified benign or malignant ovarian tumors. T...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8062553/ https://www.ncbi.nlm.nih.gov/pubmed/33888749 http://dx.doi.org/10.1038/s41598-021-87775-x |
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author | Li, Shiyun Liu, Jiaqi Xiong, Yuanhuan Pang, Peipei Lei, Pinggui Zou, Huachun Zhang, Mei Fan, Bing Luo, Puying |
author_facet | Li, Shiyun Liu, Jiaqi Xiong, Yuanhuan Pang, Peipei Lei, Pinggui Zou, Huachun Zhang, Mei Fan, Bing Luo, Puying |
author_sort | Li, Shiyun |
collection | PubMed |
description | This paper develops a two-dimensional (2D) radiomics approach with computed tomography (CT) to differentiate between benign and malignant ovarian neoplasms. A retrospective study was conducted from July 2017 to June 2019 for 134 patients with surgically-verified benign or malignant ovarian tumors. The patients were randomly divided in a ratio of 7:3 into two sets, namely a training set (of n = 95) and a test set (of n = 39). The ITK-SNAP software was used to delineate the regions of interest (ROI) associated with lesions of the largest diameters in plain CT image slices. Texture features were extracted by the Analysis Kit (AK) software. The training set was used to select the best features according to the maximum-relevance minimum-redundancy (mRMR) criterion, in addition to the algorithm of the least absolute shrinkage and selection operator (LASSO). Then, we employed a radiomics model for classification via multivariate logistic regression. Finally, we evaluated the overall performance of our method using the receiver operating characteristics (ROC), the DeLong test. and tested in an external validation test sample of patients of ovarian neoplasm. We created a radiomics prediction model from 14 selected features. The radiomic signature was found to be highly discriminative according to the area under the ROC curve (AUC) for both the training set (AUC = 0.88), and the test set (AUC = 0.87). The radiomics nomogram also demonstrated good calibration and differentiation for both the training (AUC = 0.95) and test (AUC = 0.96) samples. External validation tests gave a good performance in radiomic signature (AUC = 0.83) and radiomics nomogram (AUC = 0.95). The decision curve explicitly indicated the clinical usefulness of our nomogram method in the sense that it can influence major clinical events such as the ordering or abortion of other tests, treatments or invasive procedures. Our radiomics model based on plain CT images has a high diagnostic efficiency, which is helpful for the identification and prediction of benign and malignant ovarian neoplasms. |
format | Online Article Text |
id | pubmed-8062553 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80625532021-04-23 A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography Li, Shiyun Liu, Jiaqi Xiong, Yuanhuan Pang, Peipei Lei, Pinggui Zou, Huachun Zhang, Mei Fan, Bing Luo, Puying Sci Rep Article This paper develops a two-dimensional (2D) radiomics approach with computed tomography (CT) to differentiate between benign and malignant ovarian neoplasms. A retrospective study was conducted from July 2017 to June 2019 for 134 patients with surgically-verified benign or malignant ovarian tumors. The patients were randomly divided in a ratio of 7:3 into two sets, namely a training set (of n = 95) and a test set (of n = 39). The ITK-SNAP software was used to delineate the regions of interest (ROI) associated with lesions of the largest diameters in plain CT image slices. Texture features were extracted by the Analysis Kit (AK) software. The training set was used to select the best features according to the maximum-relevance minimum-redundancy (mRMR) criterion, in addition to the algorithm of the least absolute shrinkage and selection operator (LASSO). Then, we employed a radiomics model for classification via multivariate logistic regression. Finally, we evaluated the overall performance of our method using the receiver operating characteristics (ROC), the DeLong test. and tested in an external validation test sample of patients of ovarian neoplasm. We created a radiomics prediction model from 14 selected features. The radiomic signature was found to be highly discriminative according to the area under the ROC curve (AUC) for both the training set (AUC = 0.88), and the test set (AUC = 0.87). The radiomics nomogram also demonstrated good calibration and differentiation for both the training (AUC = 0.95) and test (AUC = 0.96) samples. External validation tests gave a good performance in radiomic signature (AUC = 0.83) and radiomics nomogram (AUC = 0.95). The decision curve explicitly indicated the clinical usefulness of our nomogram method in the sense that it can influence major clinical events such as the ordering or abortion of other tests, treatments or invasive procedures. Our radiomics model based on plain CT images has a high diagnostic efficiency, which is helpful for the identification and prediction of benign and malignant ovarian neoplasms. Nature Publishing Group UK 2021-04-22 /pmc/articles/PMC8062553/ /pubmed/33888749 http://dx.doi.org/10.1038/s41598-021-87775-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Li, Shiyun Liu, Jiaqi Xiong, Yuanhuan Pang, Peipei Lei, Pinggui Zou, Huachun Zhang, Mei Fan, Bing Luo, Puying A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography |
title | A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography |
title_full | A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography |
title_fullStr | A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography |
title_full_unstemmed | A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography |
title_short | A radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography |
title_sort | radiomics approach for automated diagnosis of ovarian neoplasm malignancy in computed tomography |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8062553/ https://www.ncbi.nlm.nih.gov/pubmed/33888749 http://dx.doi.org/10.1038/s41598-021-87775-x |
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